Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84624884

Identifier: 84624884

GI number: 84624884

Start: 3664973

End: 3665434

Strand: Reverse

Name: 84624884

Synonym: XOO_3227

Alternate gene names: NA

Gene position: 3665434-3664973 (Counterclockwise)

Preceding gene: 84624886

Following gene: 84624883

Centisome position: 74.2

GC content: 71.65

Gene sequence:

>462_bases
ATGTGCACGTCGTTCCGCCCCGCAGTGTGGGCAATCGCTCTGATCTGCAGTCCTGCCTTGGGCGCCGCGTCCCGGCCTGC
CGCTGCGCCTGCGCGCGCTCCGGTCGCGCTGCCTGCGTCGTCCGAGCAAGGCGGCGACGCGAGCGTGCCATTGCCGGCCA
CGCTGAAATCCGGCATGGGATATCGCGCGTTCGCGCAGGCGGTGATGGAGCAGGGCTGGCAACTGGTGGATCCGCTTGCG
GCCGATAGCTGCATGGCCGCTGGCGACTGCGAGATCGAGTTCCTTGCGCCCGGCGGCAGTGCGCGCCTGCGCGTGCAGGT
GGGCTCGCAGGCCGGTGCGGCGGTGGTGCAAAGCTGGCGTGCGCGACAGGTGCCGCTGGATCGCATCGGCAACACGAGCG
CTGCGGCGGGAGACGCCAGGCCTGCACCGGCGGCAGTGGACGCAGGCAACGGCTCGCGCTGA

Upstream 100 bases:

>100_bases
AATGCATCCCAAATGCAATTGCCGCAGCGCATCACAGGCATGTCAGACTAGCGCATCTTCCTCTTCCCAGTTCCCTGCCA
GGACCGCCAGGACCGTTTGA

Downstream 100 bases:

>100_bases
TTCCCCCGGCCGCAGGCCGATCGCGCATGCGGCGTATCATGGCGCGGCAGGGGCGGATTGTTTCGATCGCGCGCCTGGTT
TGATGCGCCTTTCCCGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMGYRAFAQAVMEQGWQLVDPLA
ADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWRARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR

Sequences:

>Translated_153_residues
MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMGYRAFAQAVMEQGWQLVDPLA
ADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWRARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR
>Mature_153_residues
MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMGYRAFAQAVMEQGWQLVDPLA
ADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWRARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15327; Mature: 15327

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMG
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCCCC
YRAFAQAVMEQGWQLVDPLAADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWR
HHHHHHHHHHCCCEECCCHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHH
ARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR
CCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MCTSFRPAVWAIALICSPALGAASRPAAAPARAPVALPASSEQGGDASVPLPATLKSGMG
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHCCCC
YRAFAQAVMEQGWQLVDPLAADSCMAAGDCEIEFLAPGGSARLRVQVGSQAGAAVVQSWR
HHHHHHHHHHCCCEECCCHHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHH
ARQVPLDRIGNTSAAAGDARPAPAAVDAGNGSR
CCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA