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The map label for this gene is tnpA [H]

Identifier: 84624886

GI number: 84624886

Start: 3666596

End: 3667747

Strand: Reverse

Name: tnpA [H]

Synonym: XOO_3230

Alternate gene names: 84624886

Gene position: 3667747-3666596 (Counterclockwise)

Preceding gene: 84624888

Following gene: 84624884

Centisome position: 74.24

GC content: 63.02

Gene sequence:

>1152_bases
GTGTTGACGGTGCCGGTGGACTTCAAGCCGGGCACGAGGTTCAAGGTATCGGGCCAAAAGGGGCTGCATCCGGTTCATGA
CACCGTGGTCAAGACCTACCGGCACCTGAACTTTTTCCAGCACGAGTGCTACCTGAAGGTTCGCACGCCGCGTGTGAAGC
TTGGGGACGGATCGGTTCGCCTGGTCGAGCCGGACTTCGCTGGGCGGTTGTCGGGCTTCACGCTGTTGTTCGAGGCGCTG
GTGCTGATGTTGTCGCAGCAGATGCCGTTCGCGGCCGTTGCGCGCATCGTGGGCGAGTCGGCGTACCGGTGCATGCAGGT
GTGCAACCGCTATGTCGAGATGGCCCTGGAGCAGGCCGACTTCAGCGACGTCACGTCGCTGGCCATCGACGAGACGTCGC
GCGCTCGCGGCCACGACTATGTGACCTTGGCTGCCGACGCCCAGGCGCGACGCGTGATCTTCGTGACTGAGGGGCGGGAC
GCCAAAGCCGTGAAGGCGCTGGCTGCCGATCTGGCAGCTCATGGCTGCCCTCCCGAACAGATCACCTCGGTGAGCATCGA
CATGTCGCCCGCGTTCATCAAGGGCGTAAGCGACCAGTTGCCCAACGCGCAGATCACCTTCGACAAGTTCCACGTTGTCG
GACATGCGAACGCGGCCGTGAACAAAACCAGGCGCATCGAGCAGCGCACCGAGAAGTCCCTCAAGGGCATGCGCTGGACG
CTGCTCAAGGATGTCTTCAGCCTCAAAGCGACGGCCGGCGCAGCGTTGCACGGGCTGATCACGGCACCCAAGCTCACACG
GACGGCCCGCGCGTGGCTCTACAAGGAGCAGTTGCGCGAGGCGCTTGACCGAAAGCAGATCAACGTGATGCGCGAGATGC
TCAAGCACTGGTGCGTCTGCGTGATGCGATCCAAGGTCGAGGCGATGAAGGAAGTCGCAGCCCTCGTGCGCCGCCACATG
GACGGCATCGTCGCCTGGGCGCAGACCCGTCAGACCAACGGCTTCCTTGAAGCCATCAATGGCCTGTTCCAGTCCGCCAA
GCGCAGAGCTCGCGGCTTCAAACGCCTGTCCACCATCAAGACCGTCATCTTCCTGATTGCCGGCAAGCTGGACTTCCAAA
CGTTCAACCCGCATGCCCGGCAACCCACTTGA

Upstream 100 bases:

>100_bases
GGGATGACGGCCAAGGTGTTTGAAGCGGCGCTGGGGATCGGCGCGCCGTGGTCGGTAGGCGCGGTCGGTAGGCGCGGTCG
AGTTCGACGAAGCGACCAAG

Downstream 100 bases:

>100_bases
AATTCAAGAGAGCCCTTTTTCCTGCACGGTGGTATCCACGATCACCCGCGACAACTTGCGCGCATCCACCGCCTTCATCG
TGTGAGCGGTGTTGATCGTG

Product: ISXoo13 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEAL
VLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRD
AKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVNKTRRIEQRTEKSLKGMRWT
LLKDVFSLKATAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVCVMRSKVEAMKEVAALVRRHM
DGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT

Sequences:

>Translated_383_residues
MLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEAL
VLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRD
AKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVNKTRRIEQRTEKSLKGMRWT
LLKDVFSLKATAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVCVMRSKVEAMKEVAALVRRHM
DGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT
>Mature_383_residues
MLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVRLVEPDFAGRLSGFTLLFEAL
VLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQADFSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRD
AKAVKALAADLAAHGCPPEQITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVNKTRRIEQRTEKSLKGMRWT
LLKDVFSLKATAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVCVMRSKVEAMKEVAALVRRHM
DGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIKTVIFLIAGKLDFQTFNPHARQPT

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 42952; Mature: 42952

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVR
CEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCEE
LVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQAD
EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQ
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHH
ITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVNKTRRIEQRTEKSLKGMRWT
HCEEEEECCHHHHHCHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCHHHH
LLKDVFSLKATAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVC
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMRSKVEAMKEVAALVRRHMDGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIFLIAGKLDFQTFNPHARQPT
HHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTVPVDFKPGTRFKVSGQKGLHPVHDTVVKTYRHLNFFQHECYLKVRTPRVKLGDGSVR
CEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCEE
LVEPDFAGRLSGFTLLFEALVLMLSQQMPFAAVARIVGESAYRCMQVCNRYVEMALEQAD
EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSDVTSLAIDETSRARGHDYVTLAADAQARRVIFVTEGRDAKAVKALAADLAAHGCPPEQ
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHH
ITSVSIDMSPAFIKGVSDQLPNAQITFDKFHVVGHANAAVNKTRRIEQRTEKSLKGMRWT
HCEEEEECCHHHHHCHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCHHHH
LLKDVFSLKATAGAALHGLITAPKLTRTARAWLYKEQLREALDRKQINVMREMLKHWCVC
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMRSKVEAMKEVAALVRRHMDGIVAWAQTRQTNGFLEAINGLFQSAKRRARGFKRLSTIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIFLIAGKLDFQTFNPHARQPT
HHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]