| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623606
Identifier: 84623606
GI number: 84623606
Start: 2150376
End: 2151209
Strand: Direct
Name: 84623606
Synonym: XOO_1949
Alternate gene names: NA
Gene position: 2150376-2151209 (Clockwise)
Preceding gene: 84623605
Following gene: 84623607
Centisome position: 43.53
GC content: 64.87
Gene sequence:
>834_bases ATGTCCATGTGGTCGAAATCCTTGAACTCCCATGCCGAGGCGTCCGTCAACGCGCAGGCACGTGGTGGCGTGCATGTGCA GATGACAGGCCGAATGGTCTCGACCGCAATGGCGCTCGCTCTGTGCCTGGCTAACGGCCACGCCATCGCACAGGCAGACG ATGCACCGGCATTCGACCGCCCGGGTATTCCGTTCTCCACGGAAGTAGTGCAGCCAGGCGCCTTCGCCTGGGAACAGGGC CTGCCGGATGCGAGTACCGATCGCAGTGATGGGCAGCGAACCACTGAATACACCGCCGATACGCTGCTGCGCCTGGGGCT GTTCCAGAACGTCGAGCTGCAGCTGGGGAGCGACAGCTATCGCTGGCAGCATGTCGGCGGCGCGCGGGTGCGTGGCGGTG GCGACAGCAGTGTCGGATTAAAGGTGGCCTTGCCGTCGCGCTCGGACAGTTTTCATTGGGCTGCGCTGGGCACCTATAGC GTGCCGACCGGCAGCCCGGCCTTCAGCGACGGCTATGCGCGCGAACTCGGTGTGACCGCGTCCTGGGACCTACCGCAGCA ACGCGCCATCGCGGTGTACGTCAATTACGCGCGCGACGATGGTGGGAACACCTGGACCTTCGCGCCCAATTACACGTTTT TCTCCGGTGATCGTTTCAGCAGCTACGTGGAAGCGGGTTTCGACACCGGCAGTGAGCATTCGCGCGTGGCCGGTGCGGGC GGCGCCTGGCGGCTGCCGCATGCGATGCAGCTGGACGTGTCGGTATTGCGTGGCCTGACCTCGGAGAGCCCGGATTGGCA GGGCGGCATCGGGCTGTCGATCGCGTTCGAGTGA
Upstream 100 bases:
>100_bases TGCGGCACCATGCGCGCTGTTGCTGATCGATGCAGGCAGGCTTATCGTGCCGTGGCGTTGCCCTTTTCTTGATCGCTCCG TCCTGCCAATGGTGCTGCGT
Downstream 100 bases:
>100_bases GCGCGAAGAAGTTGCGGCAACTGTAGTCAATGGTCGAGCCGAGGCCGTCGCGGATTTCTGTGCGGGCGCTGGATTGTCCA TGTTGCAGTGCCGCATGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSMWSKSLNSHAEASVNAQARGGVHVQMTGRMVSTAMALALCLANGHAIAQADDAPAFDRPGIPFSTEVVQPGAFAWEQG LPDASTDRSDGQRTTEYTADTLLRLGLFQNVELQLGSDSYRWQHVGGARVRGGGDSSVGLKVALPSRSDSFHWAALGTYS VPTGSPAFSDGYARELGVTASWDLPQQRAIAVYVNYARDDGGNTWTFAPNYTFFSGDRFSSYVEAGFDTGSEHSRVAGAG GAWRLPHAMQLDVSVLRGLTSESPDWQGGIGLSIAFE
Sequences:
>Translated_277_residues MSMWSKSLNSHAEASVNAQARGGVHVQMTGRMVSTAMALALCLANGHAIAQADDAPAFDRPGIPFSTEVVQPGAFAWEQG LPDASTDRSDGQRTTEYTADTLLRLGLFQNVELQLGSDSYRWQHVGGARVRGGGDSSVGLKVALPSRSDSFHWAALGTYS VPTGSPAFSDGYARELGVTASWDLPQQRAIAVYVNYARDDGGNTWTFAPNYTFFSGDRFSSYVEAGFDTGSEHSRVAGAG GAWRLPHAMQLDVSVLRGLTSESPDWQGGIGLSIAFE >Mature_276_residues SMWSKSLNSHAEASVNAQARGGVHVQMTGRMVSTAMALALCLANGHAIAQADDAPAFDRPGIPFSTEVVQPGAFAWEQGL PDASTDRSDGQRTTEYTADTLLRLGLFQNVELQLGSDSYRWQHVGGARVRGGGDSSVGLKVALPSRSDSFHWAALGTYSV PTGSPAFSDGYARELGVTASWDLPQQRAIAVYVNYARDDGGNTWTFAPNYTFFSGDRFSSYVEAGFDTGSEHSRVAGAGG AWRLPHAMQLDVSVLRGLTSESPDWQGGIGLSIAFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29545; Mature: 29414
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMWSKSLNSHAEASVNAQARGGVHVQMTGRMVSTAMALALCLANGHAIAQADDAPAFDR CCHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC PGIPFSTEVVQPGAFAWEQGLPDASTDRSDGQRTTEYTADTLLRLGLFQNVELQLGSDSY CCCCCCHHEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC RWQHVGGARVRGGGDSSVGLKVALPSRSDSFHWAALGTYSVPTGSPAFSDGYARELGVTA EEEECCCEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHCCCEE SWDLPQQRAIAVYVNYARDDGGNTWTFAPNYTFFSGDRFSSYVEAGFDTGSEHSRVAGAG CCCCCCCCEEEEEEEEEEECCCCEEEECCCCEEECCCHHHHHHHHCCCCCCCCCEEECCC GAWRLPHAMQLDVSVLRGLTSESPDWQGGIGLSIAFE CCCCCCCCEEECHHHHHCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure SMWSKSLNSHAEASVNAQARGGVHVQMTGRMVSTAMALALCLANGHAIAQADDAPAFDR CHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC PGIPFSTEVVQPGAFAWEQGLPDASTDRSDGQRTTEYTADTLLRLGLFQNVELQLGSDSY CCCCCCHHEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC RWQHVGGARVRGGGDSSVGLKVALPSRSDSFHWAALGTYSVPTGSPAFSDGYARELGVTA EEEECCCEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHCCCEE SWDLPQQRAIAVYVNYARDDGGNTWTFAPNYTFFSGDRFSSYVEAGFDTGSEHSRVAGAG CCCCCCCCEEEEEEEEEEECCCCEEEECCCCEEECCCHHHHHHHHCCCCCCCCCEEECCC GAWRLPHAMQLDVSVLRGLTSESPDWQGGIGLSIAFE CCCCCCCCEEECHHHHHCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA