| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yaiL [C]
Identifier: 84623605
GI number: 84623605
Start: 2149296
End: 2150030
Strand: Direct
Name: yaiL [C]
Synonym: XOO_1948
Alternate gene names: 84623605
Gene position: 2149296-2150030 (Clockwise)
Preceding gene: 84623604
Following gene: 84623606
Centisome position: 43.51
GC content: 65.03
Gene sequence:
>735_bases ATGAGCGATACCTTACGTGACCAGTTGCTTGGGTTGGGCTTCAAGTCCGCCCCCCAGCCCAAACGCAAACCCGACGCACG GCCTGCAGCGCGTGCGCATGGCGACGGTGGCAAGCCAGGACCCGGCGGCAATCGGCCGGGCCAGGGCAGGGGACCGCAGC GGCCGCATGCCGCTGCAGCGACCGACCGCAATGGCGAGCGCAAACCCAATGGCAGGCCCGAGCGTCGGCATGACGGCAAG CCCGGCGTAGCGTCGCGTCCGCAGCATCCGGCTGCAGACCGTCGTGGCCCCAGGCCGGCACGCACGCGCGAAGATATCGA TCTGGCCAAGGCCTATGCGATCCGTGCGCAGCGCGAGAAAGACGAGCGCATCGAAGCCGAGCGAGTGAAGCAGGAAGAAG CACGCCTGCGTCGCGAAGCCAAGGCCAAGCTCGAAGAGCTGCTGAAGGACAAAGGTTTGAATGATGCCGCTGCGGATATC GCCCGGCACTTTCCGTATGGCGGCAAGATCAAGCGCATTTACGTCAACGCCGATCAGCTCAGGGCGCTCAACGCTGGCGA GCTCGGCGTGCTGCAACTCAACGGTCGCTATTTGCTGGTGACTGCCGAGGTGCTCGCCGAAGCTGAGGCGGTGTTCGCCC CATCGGTCGCCTTGAAAGTGGACCCGAACGCACCGGCAGGCGAGGACCCGTACGCGGACCCCAAATATCGGGTTCCAGAC GACTTGGTCTGGTAA
Upstream 100 bases:
>100_bases CCACCTGCTCGATGATCTGGGCAAGGTGCGCTCCACGTTGTTTGCCGATGCAGCGGATGAACCGCCGCCTCCGCACTACT GATTGCAGATTGCCACCGCC
Downstream 100 bases:
>100_bases GTCCGGGACGCCTGAGGTGTGGTGTGCATGGGCGCCTGCGGGTGCCCATTTTTTGTGTGCGTGTTACCGAAAGTCGGAAT AGGCGCAACAGAGCAGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSDTLRDQLLGLGFKSAPQPKRKPDARPAARAHGDGGKPGPGGNRPGQGRGPQRPHAAAATDRNGERKPNGRPERRHDGK PGVASRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRREAKAKLEELLKDKGLNDAAADI ARHFPYGGKIKRIYVNADQLRALNAGELGVLQLNGRYLLVTAEVLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYRVPD DLVW
Sequences:
>Translated_244_residues MSDTLRDQLLGLGFKSAPQPKRKPDARPAARAHGDGGKPGPGGNRPGQGRGPQRPHAAAATDRNGERKPNGRPERRHDGK PGVASRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRREAKAKLEELLKDKGLNDAAADI ARHFPYGGKIKRIYVNADQLRALNAGELGVLQLNGRYLLVTAEVLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYRVPD DLVW >Mature_243_residues SDTLRDQLLGLGFKSAPQPKRKPDARPAARAHGDGGKPGPGGNRPGQGRGPQRPHAAAATDRNGERKPNGRPERRHDGKP GVASRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRREAKAKLEELLKDKGLNDAAADIA RHFPYGGKIKRIYVNADQLRALNAGELGVLQLNGRYLLVTAEVLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYRVPDD LVW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26715; Mature: 26584
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLRDQLLGLGFKSAPQPKRKPDARPAARAHGDGGKPGPGGNRPGQGRGPQRPHAAAA CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDRNGERKPNGRPERRHDGKPGVASRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DERIEAERVKQEEARLRREAKAKLEELLKDKGLNDAAADIARHFPYGGKIKRIYVNADQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECHHHH RALNAGELGVLQLNGRYLLVTAEVLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYRVPD HCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC DLVW CCCC >Mature Secondary Structure SDTLRDQLLGLGFKSAPQPKRKPDARPAARAHGDGGKPGPGGNRPGQGRGPQRPHAAAA CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDRNGERKPNGRPERRHDGKPGVASRPQHPAADRRGPRPARTREDIDLAKAYAIRAQREK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DERIEAERVKQEEARLRREAKAKLEELLKDKGLNDAAADIARHFPYGGKIKRIYVNADQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECHHHH RALNAGELGVLQLNGRYLLVTAEVLAEAEAVFAPSVALKVDPNAPAGEDPYADPKYRVPD HCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC DLVW CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA