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The map label for this gene is 84623267

Identifier: 84623267

GI number: 84623267

Start: 1753453

End: 1754475

Strand: Direct

Name: 84623267

Synonym: XOO_1610

Alternate gene names: NA

Gene position: 1753453-1754475 (Clockwise)

Preceding gene: 84623266

Following gene: 84623268

Centisome position: 35.49

GC content: 65.98

Gene sequence:

>1023_bases
ATGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCAGCCGTGCCCGCACGCACCGAGGCGTTCACCTTTGGCGA
CCCGACGCCGGTGCTCGATGGGCGCGGCGTGCTGGACTATCTGGAGTGCTGGCAGAACGGGCGCTGGTACGAGCCGCCGG
TGGCGCTGGATGGCCTGTCCAAGACCACGCGCAGCAATCCCTTCCTGCAGTCCGGGCTGATCTTCAAGCGCAACATGCTG
GCGCGCACCTTCAAGCCGCATCGGCTCCTGACGCGTGAGGCCTTCGAGCAGCTGTCGCTGGATTGGATCACCCTGGGCAA
TGGCTACCTCGAGCGCCGCCGCAACCGCATGGGCGGTGCGCTGTCGCTGGCTGCGCCGTTGTCCAAGTACATGCGGCGCG
GTATCACCGAGGGCGAGTACTTCCAGGTGCGCACCTGGCACGACGAGCACGTGTTCGAGCCGGGCAGCGTGTTCCAGCTG
CGCGAAGCCGATGTCGATCAAGAACTCTACGGCCTGCCTGAGTGGATGCCGGCGATGCAGTCCGCGCTGCTCAACGAATC
GGCCACGCTGTTTCGCCGCAAGTACTACAACAACGGCTCGCATGCCGGTTTCATCCTGTACCTGACCGACCCGCAGCAGA
GCCAGGAAGACGTCGATGCGCTGCGCACCGCCATGAAGGGCGCCAAGGGGCCGGGCAACTTCCGCAACCTGTTCCTGTAT
TCGCCCGGCGGCAACAAGGATGGGCTGAAGCTCATCCCGGTCAGCGAAGTGGCGGCCAAGGACGAGTTCAGCGGCATCAA
AGGCATCACCCGCGACGACATGCTCGCCGCGCTGCGCATCCCACCGCAACTCATGGGCATCGTGCCGCAGAACGCAGGCG
GCTTCGGATCGATCCGTGAGGCCGCTGCCGTGTGGGCCGCCAACGAGCTGGAGCCGCTGCAGGCGCGCATGCTGAAGATC
AACGACTGGGTGGGCGATGAGGTGATCTCGTTCACCCAGTACGCGCCGCCAGCGACCGCGTAA

Upstream 100 bases:

>100_bases
CCGGCCACGCGGACCTGGCGTGGGCACTGTTCCACGCGCTGCAGAACGAACCGCTGGAAGGGCGCACCGCGCGCAACTCC
GGCTTCATGGAGATCTCTTG

Downstream 100 bases:

>100_bases
TCCTTTCCCACCGCAAGACCACGCAATGCTCAAGAACCTCCGTTGTGGCGAATGCGCCCGCCTGCTGTGCAAGGCCGGCG
CCTTCGATGAAATCCAGATC

Product: phage-related capsid packaging protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML
ARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQL
READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI
NDWVGDEVISFTQYAPPATA

Sequences:

>Translated_340_residues
MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML
ARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQL
READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI
NDWVGDEVISFTQYAPPATA
>Mature_340_residues
MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML
ARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQL
READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI
NDWVGDEVISFTQYAPPATA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 37856; Mature: 37856

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLS
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCC
KTTRSNPFLQSGLIFKRNMLARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGA
HHHCCCCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCE
LSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQLREADVDQELYGLPEWMPAMQ
EHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEHHCCCCHHHHCCCHHHHHHH
SALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIRE
CCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHEECCCCCCCCCHHHH
AAAVWAANELEPLQARMLKINDWVGDEVISFTQYAPPATA
HHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLS
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCC
KTTRSNPFLQSGLIFKRNMLARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGA
HHHCCCCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCE
LSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQLREADVDQELYGLPEWMPAMQ
EHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEHHCCCCHHHHCCCHHHHHHH
SALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFLY
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIRE
CCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHEECCCCCCCCCHHHH
AAAVWAANELEPLQARMLKINDWVGDEVISFTQYAPPATA
HHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]