| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623266
Identifier: 84623266
GI number: 84623266
Start: 1751669
End: 1753453
Strand: Direct
Name: 84623266
Synonym: XOO_1609
Alternate gene names: NA
Gene position: 1751669-1753453 (Clockwise)
Preceding gene: 84623240
Following gene: 84623267
Centisome position: 35.46
GC content: 63.14
Gene sequence:
>1785_bases GTGGGCTGCACCCTGGTCGGCATGCAGAGCGTTTCCACCCAGCTCCCGATGGACACCCGCAGACAGGCCAAGTTCCTGTA CTGGATGGGATGGCGCGTGACCGAAATTGCGCAGGCCATCGGCGAGAACGCGAAGACTGTACACAGCTGGAAGTCGCGTG ACGAGTGGGATCGCGCAGACAACGTGGAGCGCATCGGTGGTGCACTGGAAGCGCGCCTTGTCGTGCTGATCATGAAACCG GAAAAATCCGGTGGCGACTTCAAAGAAATTGATCTGCTGCATCGGCAGTTGGAGCGCCAGGCGCGCATCCAGCGCTACCA AGGCGGCGGCAACGAAGCCGACTTGAATCCGGCCGTGGCGAATCGCAACGCCGCGCCGAAAAAGAAGCCCAAGCGCAACG ACTTCACTGAGGAACAGGTCGAGCAGCTGACCACGGCATTCATCGACGGCTGCTTCGACTATCAGCGCGATTGGTACCGG GCCAGCAACGAGCGTACCCGCGTCATCCTGAAGTCGCGTCAGATCGGTGCGACGTTTTACTTCGCCCGTGAGGCGCTGAT CGATGCGCTCACCACCGGGCGCAATCAGATCTTCCTCAGCGCATCCAAGGCACAGGCGCATCTGTTCCGTGGCTACATGC AGCAGTTCGTGCGCGAGACGATCGACGAGACGCTCTCCGGCGGCGACAGCATCGTGTTTCCCAACGGCGCCGAGCTGTTC TTCCTGGGAACCAATGCGCGCACCGCGCAGGGTTACCACGGCAATTTCTACTTCGACGAGTTCTTCTGGACCTATGGGTT CAACGAATTGAACAAGGTCGCCAGCGGCATGGCGATGCACAAGAAGTGGCGCAAGACCTACTTCAGCACGCCATCCAGCA TGGCCCATGAGGCCTACACCTTCTGGACCGGCGAGCGCCGCAACAAGGGCAAACCGGCCGCACAGCGCATCCAGATCGAT GTCTCGCACGATGCATTGGCCGGCGGGCGCCGCTGCCAGGACCGCGCCTGGCGGCAGATCGTCAACATCCTCGACGCGCA GCGCCGTGGCTGCGACCTGTTCGACATCGACGAGCTGCGCGAGGAATACAGCCCGGACGCGTTCGCCAACCTGTTGATGT GCGACTTCGTCGACGACGGCGCCAGCATCTTCCCGTTGGCGATGCTGCAGCCGTGCATGGTCGACAGCTGGGTCGAGTGG GGCCAGGACTACAAACCGTTCGCCGTGCGCCCCTACGGCGATCGCGCCGTGTGGATCGGCTACGACCCCGCCGAGACGGG AGATACCGCCGGACTGGTTGTGTTGGCACCACCGCAGCAGCCCGGCGGCAAGTTCCGGCTGTTGGAGCGGATCCAGTTCC GGGGCATGGACTTTGCCAAGCAGGCAGCCGAGATCGAGCGCATCACGCGCCGCTACTGGGTGACCTACATCGGCATCGAC ACCACCGGCATGGGCAGCGGTGTGGCGCAGTTGGTGAAGCAGTTCTTCCCGAATCTGGTCACCTTCAGCTACTCGCCTGA AGTGAAGACACGCCTGGTGCTCAAGGCGTTCGACGTGATCCACAACGGGCGGCTGGAGTTCGACGCCGGCTGGACCGACG TGGCGCAGTCGTTGATGGCCATCCGCAAGACCATGACGGCCAGTGGCCGGCAGTCCACCTTCAGCGCTGGCCGCTCGGAA GAGACCGGCCACGCGGACCTGGCGTGGGCACTGTTCCACGCGCTGCAGAACGAACCGCTGGAAGGGCGCACCGCGCGCAA CTCCGGCTTCATGGAGATCTCTTGA
Upstream 100 bases:
>100_bases CGTTTGCGATGACCCATGGTCAAACGCGACGCACAGCGCAGCAACGAAACCACCGTGTAAACAAGGTGGTTACGCGTCGC TCAACTGTCGGGATTAAGAG
Downstream 100 bases:
>100_bases TGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCAGCCGTGCCCGCACGCACCGAGGCGTTCACCTTTGGCGAC CCGACGCCGGTGCTCGATGG
Product: phage-related terminase
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MGCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKP EKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYR ASNERTRVILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQID VSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEW GQDYKPFAVRPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMAIRKTMTASGRQSTFSAGRSE ETGHADLAWALFHALQNEPLEGRTARNSGFMEIS
Sequences:
>Translated_594_residues MGCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKP EKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYR ASNERTRVILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQID VSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEW GQDYKPFAVRPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMAIRKTMTASGRQSTFSAGRSE ETGHADLAWALFHALQNEPLEGRTARNSGFMEIS >Mature_593_residues GCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKPE KSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYRA SNERTRVILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELFF LGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQIDV SHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEWG QDYKPFAVRPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGIDT TGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMAIRKTMTASGRQSTFSAGRSEE TGHADLAWALFHALQNEPLEGRTARNSGFMEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67490; Mature: 67359
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRAD CCCEEEEHHHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHCCCCHHHHHHCCCCHHHHHC NVERIGGALEARLVVLIMKPEKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVA CHHHHCCHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC NRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYRASNERTRVILKSRQIGATFY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH FAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYT EEECCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEE FWTGERRNKGKPAAQRIQIDVSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELR EECCCCCCCCCCCHHEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEWGQDYKPFAVRPYGDRAVWIG HHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE YDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECC TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMA CCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH IRKTMTASGRQSTFSAGRSEETGHADLAWALFHALQNEPLEGRTARNSGFMEIS HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC >Mature Secondary Structure GCTLVGMQSVSTQLPMDTRRQAKFLYWMGWRVTEIAQAIGENAKTVHSWKSRDEWDRAD CCEEEEHHHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHCCCCHHHHHHCCCCHHHHHC NVERIGGALEARLVVLIMKPEKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVA CHHHHCCHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC NRNAAPKKKPKRNDFTEEQVEQLTTAFIDGCFDYQRDWYRASNERTRVILKSRQIGATFY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH FAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYT EEECCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEE FWTGERRNKGKPAAQRIQIDVSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIDELR EECCCCCCCCCCCHHEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEWGQDYKPFAVRPYGDRAVWIG HHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE YDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECC TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNGRLEFDAGWTDVAQSLMA CCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH IRKTMTASGRQSTFSAGRSEETGHADLAWALFHALQNEPLEGRTARNSGFMEIS HHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA