| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623106
Identifier: 84623106
GI number: 84623106
Start: 1578289
End: 1579125
Strand: Direct
Name: 84623106
Synonym: XOO_1449
Alternate gene names: NA
Gene position: 1578289-1579125 (Clockwise)
Preceding gene: 84623105
Following gene: 84623107
Centisome position: 31.95
GC content: 66.43
Gene sequence:
>837_bases ATGAATGCAACGTCCTTCAATCGCCTGCGTGGCACCCGTGCCGTTCGCACCAGCGTCCTCGCCTGCATGACCGCCATTCC GTGCATCGCGCATGCACAAACCGATCTGACCGGGAGCTCGCGCCTGCTGGGAGACCGGACTGAAATCACTGCGGGCGCCG CAGCAGTGGCCACGCCAGACTATGCCGGTGCCGAGCGCGCACGCGTGCAATTCAATCCGGTATTGGTGGTGCAACGTGGC GTGCTGTTCTTCGACACGGCGCGCGGCGCCGGCCTGCAATTCCAGAGCAACTCTGGCTTCTACATCTCGCAATCGCTGTA TTACGACCTGGGCCGGCTGCAAAGCGACAGCAACTGGCGGCCGGGCTCGCGCCTGCTGGCGGGCATGGGCGATGTGCCTG GGTCGGTGACCGCACGCACGCTGGTGATGCAGCAGGTGACGCCCTACGTGAACGTCAATGCAGAGGCGGAATGCGCACTC AGGGATGCAGCGCGCCGCAACCGCTATCGCGCCGGTGTGGAGTTCACCCTGCTGCATCGCGCCAGCGACACGGTGACCCT GGATCTGGATGTGCATGGCGGCGACCACCGCTTCAATCAGGCCTCTTTCGGCGTCACCGACGCGCAAGCGGAGCGGACGC GTTTTGCGGCGTTCAACGCCGGATCCGGCGTCTACGCCGCCGCGGTCGGTGGCAGTTGGACGCATTCGGTGGGCGACCAC TGGGCCACCACGCTGGGGGTCACCGGCACGCGCTACCTGGACAACGCCGAAGACAGCCCGCTGGTGGCACGCCGCGCGGT GGTCGGCGGCACCTTTGCACTGACCTACAGCCGCTGA
Upstream 100 bases:
>100_bases GACACCGCACGTCAGCGCGTGCTGAGCCGTATTGCGCTGTTTCAGGCGTTCTACGGCGTGCGCCTGCCCACCGCTTCCTG ACTTCCGCCGGAGACTTCCG
Downstream 100 bases:
>100_bases GCGGCACAGACCGGGGGATCGAAGGATGACGATGTTTTATCGCGGCCTGGTGTGCGGCACGTTGCTGCTGGCACTAGCCG CCTGCAGCGGGCCGGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: MipA Family Protein; MltA-Interacting MipA; Outer Membrane Protein; Conserved Protein; MipA Family MltA-Interacting Protein; Outer Membrane Protein Yiat
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPDYAGAERARVQFNPVLVVQRG VLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWRPGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECAL RDAARRNRYRAGVEFTLLHRASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR
Sequences:
>Translated_278_residues MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPDYAGAERARVQFNPVLVVQRG VLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWRPGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECAL RDAARRNRYRAGVEFTLLHRASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR >Mature_278_residues MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPDYAGAERARVQFNPVLVVQRG VLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWRPGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECAL RDAARRNRYRAGVEFTLLHRASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29804; Mature: 29804
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC YAGAERARVQFNPVLVVQRGVLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWR CCCCCCCEEEECEEEEEECCEEEEECCCCCCEEEECCCCEEEEHHHHHHHHHCCCCCCCC PGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECALRDAARRNRYRAGVEFTLLHR CHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEE ASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEEECCCCCCCCCCCH WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR HHHHCCCCCCEECCCCCCCCHHHHHHEECCEEEEEECC >Mature Secondary Structure MNATSFNRLRGTRAVRTSVLACMTAIPCIAHAQTDLTGSSRLLGDRTEITAGAAAVATPD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC YAGAERARVQFNPVLVVQRGVLFFDTARGAGLQFQSNSGFYISQSLYYDLGRLQSDSNWR CCCCCCCEEEECEEEEEECCEEEEECCCCCCEEEECCCCEEEEHHHHHHHHHCCCCCCCC PGSRLLAGMGDVPGSVTARTLVMQQVTPYVNVNAEAECALRDAARRNRYRAGVEFTLLHR CHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEE ASDTVTLDLDVHGGDHRFNQASFGVTDAQAERTRFAAFNAGSGVYAAAVGGSWTHSVGDH CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCEEEEECCCCCCCCCCCH WATTLGVTGTRYLDNAEDSPLVARRAVVGGTFALTYSR HHHHCCCCCCEECCCCCCCCHHHHHHEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA