| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622866
Identifier: 84622866
GI number: 84622866
Start: 1315725
End: 1316537
Strand: Direct
Name: 84622866
Synonym: XOO_1209
Alternate gene names: NA
Gene position: 1315725-1316537 (Clockwise)
Preceding gene: 84622864
Following gene: 84622867
Centisome position: 26.63
GC content: 60.76
Gene sequence:
>813_bases ATGCAGCTGACAGATTTGAGCAGCCGGGTGATTCCGGCCAATGAGTACCGCCGTGAGCGGTGGCGCAATCAATTGGGTTG GACGCGCGAGATCCTGCGTCTGGGTGATGCAGACGGATGGGCGTTGCGGCTGTCGATTGCCGAGATCGAGCAGGATGCCG CGTTTTCAGCATTCCCAGGTATCGATCGTGAGCTGGTGCTGTTGCGGGGCAATGGCATCCGCTTGACGTTCGGCAATCGC GATGCTGATGTCGATACCGATACCGATACCGATACCGGTGCGAGTTCTAGCGCCAATGTCAGTGCCAACCAAACCGGAAC CGTTGCAGGTGCCACTGCCTGGAAGGTTGACTGTCCAGAAGCTGTTGGTGAGGAGAGTGCCGGCGAGCGTGCTGGCGTCC GTGAGGCGTTGAGCAGTGCTGAGCATCTGGTTGCAAACCCTGCCGACAGCGGGCGCTGCGTGGATTTATTGCCGCCCTAT CAACGCGTGCGATTTTCCGGCGAAGAGTCGGTGCATGCTGTGCTGCTGGACGGTCCGACCCAGGATTTCAATCTGATGTG GCGGCGCGACTTGCTGCAGACCGAGGTACTGCATCGTCCGTTGGTCGGCATCATGCTGTTCTTTGCAGACCCGTGTAGCG CCTGGGCGATCCACTTGCTTGCCGGCCAGGCGAGCTTCGGGCGCGATAGCGGTTTGCCGCCGTTAGCGGTTGGCGATACC GCGTGGCTGAGCGCAGCGACACGCACCCGCTACGTGCTCGATGGTGGTGGCGAATTGTTGGCGATCCGGGTGAGTCCGCA GCCAGAACATTGA
Upstream 100 bases:
>100_bases GCTGTGCTATGCGCTTGGTTTTGCTTTGCTGATGCGGGCGAGGCCGCCCGGCAACGATGCGCGTGAGCGCCGGGCGCGAG GCTTCAGGCACAATGCGCAG
Downstream 100 bases:
>100_bases ACCTGACGGACAGCGCTACTCAGTCCGGCCTGCGGCGGATCCGACGTCCCCCCGATTTTGAGTAGCCCCCCAGTTTGGAG TCCAATTCCCTCACCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MQLTDLSSRVIPANEYRRERWRNQLGWTREILRLGDADGWALRLSIAEIEQDAAFSAFPGIDRELVLLRGNGIRLTFGNR DADVDTDTDTDTGASSSANVSANQTGTVAGATAWKVDCPEAVGEESAGERAGVREALSSAEHLVANPADSGRCVDLLPPY QRVRFSGEESVHAVLLDGPTQDFNLMWRRDLLQTEVLHRPLVGIMLFFADPCSAWAIHLLAGQASFGRDSGLPPLAVGDT AWLSAATRTRYVLDGGGELLAIRVSPQPEH
Sequences:
>Translated_270_residues MQLTDLSSRVIPANEYRRERWRNQLGWTREILRLGDADGWALRLSIAEIEQDAAFSAFPGIDRELVLLRGNGIRLTFGNR DADVDTDTDTDTGASSSANVSANQTGTVAGATAWKVDCPEAVGEESAGERAGVREALSSAEHLVANPADSGRCVDLLPPY QRVRFSGEESVHAVLLDGPTQDFNLMWRRDLLQTEVLHRPLVGIMLFFADPCSAWAIHLLAGQASFGRDSGLPPLAVGDT AWLSAATRTRYVLDGGGELLAIRVSPQPEH >Mature_270_residues MQLTDLSSRVIPANEYRRERWRNQLGWTREILRLGDADGWALRLSIAEIEQDAAFSAFPGIDRELVLLRGNGIRLTFGNR DADVDTDTDTDTGASSSANVSANQTGTVAGATAWKVDCPEAVGEESAGERAGVREALSSAEHLVANPADSGRCVDLLPPY QRVRFSGEESVHAVLLDGPTQDFNLMWRRDLLQTEVLHRPLVGIMLFFADPCSAWAIHLLAGQASFGRDSGLPPLAVGDT AWLSAATRTRYVLDGGGELLAIRVSPQPEH
Specific function: Unknown
COG id: COG3758
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29320; Mature: 29320
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTDLSSRVIPANEYRRERWRNQLGWTREILRLGDADGWALRLSIAEIEQDAAFSAFPG CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCC IDRELVLLRGNGIRLTFGNRDADVDTDTDTDTGASSSANVSANQTGTVAGATAWKVDCPE CCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCHH AVGEESAGERAGVREALSSAEHLVANPADSGRCVDLLPPYQRVRFSGEESVHAVLLDGPT HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHEECCCCCEEEEEEECCC QDFNLMWRRDLLQTEVLHRPLVGIMLFFADPCSAWAIHLLAGQASFGRDSGLPPLAVGDT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHCCCCCCCCCCCCCEEECCH AWLSAATRTRYVLDGGGELLAIRVSPQPEH HHHHHHHCEEEEEECCCCEEEEEECCCCCC >Mature Secondary Structure MQLTDLSSRVIPANEYRRERWRNQLGWTREILRLGDADGWALRLSIAEIEQDAAFSAFPG CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCC IDRELVLLRGNGIRLTFGNRDADVDTDTDTDTGASSSANVSANQTGTVAGATAWKVDCPE CCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCHH AVGEESAGERAGVREALSSAEHLVANPADSGRCVDLLPPYQRVRFSGEESVHAVLLDGPT HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHEECCCCCEEEEEEECCC QDFNLMWRRDLLQTEVLHRPLVGIMLFFADPCSAWAIHLLAGQASFGRDSGLPPLAVGDT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHCCCCCCCCCCCCCEEECCH AWLSAATRTRYVLDGGGELLAIRVSPQPEH HHHHHHHCEEEEEECCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA