| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622867
Identifier: 84622867
GI number: 84622867
Start: 1317194
End: 1318192
Strand: Direct
Name: 84622867
Synonym: XOO_1210
Alternate gene names: NA
Gene position: 1317194-1318192 (Clockwise)
Preceding gene: 84622866
Following gene: 84622869
Centisome position: 26.66
GC content: 62.56
Gene sequence:
>999_bases ATGCTAGGACCGTCGCTCCACCGAGACCAGATCATGGCCATGAATCGTGTGCAGTTCCAAGCCGGGCTGTCGTTGCCGGC GTTCCTCAAGCGCTATGGCAACGCGCAGCAGTGCGAGCAGGCGTTGGAGATCTCGCGCTGGCCACAGAGCTTTGTTTGTC CGCGTTGCGCCGCTACCGCGCACAGTCGATTCCAGCGTCACGGCACCACGTACTGGCAGTGCACGGCCTGCTATCGCCAG ACCAGCCTGCGCTCGGGCACGGTGATGGACAACAGCAAGCTGCCGCTACGCACCTGGCTGCTTGGCATGTATCTGCTGGG CCAGAGCAAGACGAACCTGTCGGCGCTGGAGTTGATGCGACACCTGGGAGTGAGCTACCCGACAGCGTGGCCAATGAAGC ACAAGCTGATGCAGGCCATGACCCAACGCGAGGCGAAGCGCAAGTTGGGCGTGATCGTGCAACTGGACGATGCCTACCTG GGAGGAGAACGCAACGGTGGCAAGGCCGGGCGCGGCTCGGAGAACAAGCGTCCTTTCGTGATCGCCGTGGAGACCACTGA AGACGGTCGTCCATTGCGCGCGGTGATGGATCCGGTCCCAGGCTTCACCAAGGCGGCGCTGTCGGAATGGATCGGGCAAC GCCTGCATCCTGGAGCAGATGTCTACAGTGATGGACTCGGTGCGTTTCGAGCACTGGAAGCCGAGCACGCGCACACGGTG ATCGAAGGCAGCGGTCGAAGTCGCTGCGAGGCAGAGAACGCACGCTGGGTCAACGTGGTGTTGTCCAACCTAAAGCGTTC GCTGGACGGTGCCTATCACGCCTTCAAATTCGCCAAATACGCCCAGCGCTACCTGGCAGAGACGATGTGGCGGTTCAACC GCCGTTTCGATCTGACCCGGCTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGTCCGAGCGGGCCCTG CGTGATGTCACCATGTTCACCGCTGAAAGTGCGTGCTAA
Upstream 100 bases:
>100_bases AACGAACACTGGCAATTCCAGCACACCGAAAACGCAGATGAAGCCTCCTGATTAGCACGATCTTTCAGCACAGTCGCAGC CAGTGAGAGCCGACCGGTCG
Downstream 100 bases:
>100_bases TCAGGTGAAGCCTTGCAATGGATGTGGTCTGGGGGTTTTTCAGGGGCGACTATGTAGATTCACCGCGCTGGTGTCGTTGG TGTCGTAGTCGGCCTGCGAC
Product: ISXo5 transposase
Products: NA
Alternate protein names: ISSpo8 Transposase; ISSpo3 Transposase; ISXo2 Transposase; ISXo2 Transposase; Outer Membrane Efflux Protein; ISSod11 Transposase; ISXo5 Transposase; LOW QUALITY PROTEIN ISSpo3 Transposase; Conserved Transposase; Unclassified Family Transposase
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQSFVCPRCAATAHSRFQRHGTTYWQCTACYRQ TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREAKRKLGVIVQLDDAYL GGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL RDVTMFTAESAC
Sequences:
>Translated_332_residues MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQSFVCPRCAATAHSRFQRHGTTYWQCTACYRQ TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREAKRKLGVIVQLDDAYL GGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL RDVTMFTAESAC >Mature_332_residues MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQSFVCPRCAATAHSRFQRHGTTYWQCTACYRQ TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREAKRKLGVIVQLDDAYL GGERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL RDVTMFTAESAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37286; Mature: 37286
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQSFVCPRCAATA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHH HSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMR HHHHHHCCCCEEEHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH HLGVSYPTAWPMKHKLMQAMTQREAKRKLGVIVQLDDAYLGGERNGGKAGRGSENKRPFV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEECCCCCCCCCCCCCCCCCCEE IAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV EEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVPSLLAAAAASKPWSERALRDVTMFTAESAC HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQSFVCPRCAATA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHH HSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMR HHHHHHCCCCEEEHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH HLGVSYPTAWPMKHKLMQAMTQREAKRKLGVIVQLDDAYLGGERNGGKAGRGSENKRPFV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCEECCCCCCCCCCCCCCCCCCEE IAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV EEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVPSLLAAAAASKPWSERALRDVTMFTAESAC HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA