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The map label for this gene is yeaD [H]

Identifier: 84621918

GI number: 84621918

Start: 285021

End: 287183

Strand: Direct

Name: yeaD [H]

Synonym: XOO_0261

Alternate gene names: 84621918

Gene position: 285021-287183 (Clockwise)

Preceding gene: 84621917

Following gene: 84621919

Centisome position: 5.77

GC content: 69.63

Gene sequence:

>2163_bases
ATGACGCTGCCCCGGCGCGCATTGCCGTTGGTGCTGGGACTGCTGCCACTGGCCGCCTGCGCCGATCCCGCCTTCGACCG
CTGCCTGGCTGGCCTGCAGACCCAGGCCGCTGCCAAGGGCGTGGACCCTGCAGGCTTTCAGCGTTTCACCGCCGGGCTGG
TGCCTGATCCCAGCGTGTTGCCGCTGCTGGATGCACAGCCCGAATTCACCACGCCGATCTGGGATTACCTGGCCAGCTTG
GTCGATAACCAGCGCGTGACCGATGGCCAGGCCATGCTGGTCACCCACCGCGCGCTGTTGACTCGCCTGTCCGAACAAAC
CGGCGTGGACCCGGCCACCATCGTGGCGGTGTGGGGCGTGGAGAGCGACTACGGCCGCGTCACCGGCAAGCGCCCGCTGC
TGGTGTCGCTGGCCACGCTGTCGTGTGCAGGCCGCCGCCAGCCGTTCTTCCGTGACGAATTCCTCGCCTTGCTCAGCCTG
CTGCAACGAGGCGATCTGGCTGCGGATGGGCTGACCGGCTCCTGGGCCGGCGCATTCGGGCAGACCCAGTTCATGCCCTC
GACCTACACCCGCATCGCGGTGGATGGCGACGGCGACGGCCGCCGCGATCTGGTCGCCAGCATTCCCGACGCACTGGCCT
CGACCGCCAACTATCTGGTCAAGGCCGGCTGGGAACGCGCCCGCCCGTGGGGCATGGAAGTCACGCTGCCGCGCGGGTTC
GATGCCAGCAAGGCCGGCCGCACCCGCCGCCAACCGCTGCAGGCCTGGCAAACCGCCGGCCTGCTCGGCACCGACGGCAA
ACCGCTGGCACCGATCGGGTTGCCGGCGGAGACCCCCGCCGCCTTGCTGCTGCCGGCCGGCGCCACCGGCCCGGCGTTCC
TGGTGTTCCGCAACTACGACGCCATTTATGCTTACAACGCCGCCGAAAGTTACGCGCTGTCCATCGCCCTGCTCGCCGAC
CGCCTGCGCGGCGGCCCCGGCCTGATTGCCACCTGGCCCACCGACGACCCGGGCCTGGGGCGGCCCGAACGGCGCGAACT
GCAGCAGTTGCTGCTCGCCCGCGGCTACCAGATCGGCGAGGCCGACGGCATGGTCGGCAGCGCCACCCGCCGTGCCATCC
AGGTCGAGCAGATCCGCCTGGGCCTGCAACCGGCCGACGGCCGTCCCGGCCAACGCATCCTCACCGCCCTGCGCGCCGCG
CCGCCGCTCGCCGGCGTTGCGGCCGTTCGCGCCACCGCCTTCAAGCTGCCGACCGCATACCCGGCCTTCGCCCAATCCGC
CATCGTCCATAAGGCATCCCCCATGTCCGACACCACCGGCCTGACCACAGGCGATTTCCACGGCTTTCCATCGCTGCTGA
TCGAAACGCCGTTCTCCACCGCGGCCATCAGCCTGTTCGGCGGGCAACTCGTGTCGTTCGTGCCCAAGGGCGGCCAAGAC
GTGATGTGGCTGTCGCCGCTCGCCAAGCAGCCGCCCACCCCGATCCGCGGTGGTGCGCCGGTGTGCTGGCCGTATTTCGG
TCGCCAGGGCCAGATCGGCGATGTCCCCGCCCACGGCTTCGTCCGCACCGTGGCCTGGCGACTCACCGAAAGCCGCCGCG
AAGACGACGGCACCGTGGTGCTCACGCTCACCCCGCCGCGCTTGGACGACCTGGCGTTGCGCCTGCGCATGACGCTGCGC
ATCGGCCGCACGCTTGAGCAACGCCTGATCACTGAAAACACCAGCGCCGCCCCGGTGCGTTTCACCCAGGCGCTGCACAA
CTATTTCCGCGTCGGCGACGCGCTGAAGATCAGCGTGCAGGGCCTGGATGGCCTGGACTACCTCGATAAATACGAGAACT
ACGCTACCGCACACCGTCAGCAAGGCGACTGGAGCCTGCGCGACCCACGCGATCCCGGCCGCAGCGACCGTATCTACACC
AATGCCGGTGGCCGCTACACGCTCACCGACCCGGTGCTCGGCCGCCGCATCGTCATCGCCACCGAAGGCAGCCGCTCGCT
GGTGGCTTGGAATCCGGGCGAAGAGGCCGGCAAGAAGATGGCCGACGTGGGCGACGGCTGGCGCGACTACGTCTGCCTGG
AAGCGGCCAACGCCGGCCCGGATGTGATCGAACTCGCCCCCGGCGCCAGCCACACCCTGACCCAGACCATCAGTGTCGAG
TAA

Upstream 100 bases:

>100_bases
CACGCCTGTCGCCAGCCAGGTTGGCTATCCTCGGCGGCTCGACTTGCCGCGCAGGAGAACTCCACCGCATGACGTCCGCC
CACCTGCCGGCCATCGCGCC

Downstream 100 bases:

>100_bases
CGGCCACCTCCCGCCGCGACAAGCGGGGCAGCAGCGCACGGACGCCGCCTCATCCTTCTCCCTTCGGGACATTGTCCTCC
TTGCATGGGGGAAAAGGTGC

Product: transglycolase

Products: NA

Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MTLPRRALPLVLGLLPLAACADPAFDRCLAGLQTQAAAKGVDPAGFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASL
VDNQRVTDGQAMLVTHRALLTRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRDEFLALLSL
LQRGDLAADGLTGSWAGAFGQTQFMPSTYTRIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGF
DASKAGRTRRQPLQAWQTAGLLGTDGKPLAPIGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLAD
RLRGGPGLIATWPTDDPGLGRPERRELQQLLLARGYQIGEADGMVGSATRRAIQVEQIRLGLQPADGRPGQRILTALRAA
PPLAGVAAVRATAFKLPTAYPAFAQSAIVHKASPMSDTTGLTTGDFHGFPSLLIETPFSTAAISLFGGQLVSFVPKGGQD
VMWLSPLAKQPPTPIRGGAPVCWPYFGRQGQIGDVPAHGFVRTVAWRLTESRREDDGTVVLTLTPPRLDDLALRLRMTLR
IGRTLEQRLITENTSAAPVRFTQALHNYFRVGDALKISVQGLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYT
NAGGRYTLTDPVLGRRIVIATEGSRSLVAWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLTQTISVE

Sequences:

>Translated_720_residues
MTLPRRALPLVLGLLPLAACADPAFDRCLAGLQTQAAAKGVDPAGFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASL
VDNQRVTDGQAMLVTHRALLTRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRDEFLALLSL
LQRGDLAADGLTGSWAGAFGQTQFMPSTYTRIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGF
DASKAGRTRRQPLQAWQTAGLLGTDGKPLAPIGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLAD
RLRGGPGLIATWPTDDPGLGRPERRELQQLLLARGYQIGEADGMVGSATRRAIQVEQIRLGLQPADGRPGQRILTALRAA
PPLAGVAAVRATAFKLPTAYPAFAQSAIVHKASPMSDTTGLTTGDFHGFPSLLIETPFSTAAISLFGGQLVSFVPKGGQD
VMWLSPLAKQPPTPIRGGAPVCWPYFGRQGQIGDVPAHGFVRTVAWRLTESRREDDGTVVLTLTPPRLDDLALRLRMTLR
IGRTLEQRLITENTSAAPVRFTQALHNYFRVGDALKISVQGLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYT
NAGGRYTLTDPVLGRRIVIATEGSRSLVAWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLTQTISVE
>Mature_719_residues
TLPRRALPLVLGLLPLAACADPAFDRCLAGLQTQAAAKGVDPAGFQRFTAGLVPDPSVLPLLDAQPEFTTPIWDYLASLV
DNQRVTDGQAMLVTHRALLTRLSEQTGVDPATIVAVWGVESDYGRVTGKRPLLVSLATLSCAGRRQPFFRDEFLALLSLL
QRGDLAADGLTGSWAGAFGQTQFMPSTYTRIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGFD
ASKAGRTRRQPLQAWQTAGLLGTDGKPLAPIGLPAETPAALLLPAGATGPAFLVFRNYDAIYAYNAAESYALSIALLADR
LRGGPGLIATWPTDDPGLGRPERRELQQLLLARGYQIGEADGMVGSATRRAIQVEQIRLGLQPADGRPGQRILTALRAAP
PLAGVAAVRATAFKLPTAYPAFAQSAIVHKASPMSDTTGLTTGDFHGFPSLLIETPFSTAAISLFGGQLVSFVPKGGQDV
MWLSPLAKQPPTPIRGGAPVCWPYFGRQGQIGDVPAHGFVRTVAWRLTESRREDDGTVVLTLTPPRLDDLALRLRMTLRI
GRTLEQRLITENTSAAPVRFTQALHNYFRVGDALKISVQGLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYTN
AGGRYTLTDPVLGRRIVIATEGSRSLVAWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLTQTISVE

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87081973, Length=256, Percent_Identity=34.375, Blast_Score=135, Evalue=8e-33,
Organism=Escherichia coli, GI1789053, Length=230, Percent_Identity=34.7826086956522, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6323746, Length=287, Percent_Identity=27.1777003484321, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: =5.1.3.15 [H]

Molecular weight: Translated: 77350; Mature: 77219

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPRRALPLVLGLLPLAACADPAFDRCLAGLQTQAAAKGVDPAGFQRFTAGLVPDPSVL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
PLLDAQPEFTTPIWDYLASLVDNQRVTDGQAMLVTHRALLTRLSEQTGVDPATIVAVWGV
EEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC
ESDYGRVTGKRPLLVSLATLSCAGRRQPFFRDEFLALLSLLQRGDLAADGLTGSWAGAFG
CCCCCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QTQFMPSTYTRIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGF
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCC
DASKAGRTRRQPLQAWQTAGLLGTDGKPLAPIGLPAETPAALLLPAGATGPAFLVFRNYD
CCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCC
AIYAYNAAESYALSIALLADRLRGGPGLIATWPTDDPGLGRPERRELQQLLLARGYQIGE
EEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
ADGMVGSATRRAIQVEQIRLGLQPADGRPGQRILTALRAAPPLAGVAAVRATAFKLPTAY
CCCCCCHHHHHHHEEEHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PAFAQSAIVHKASPMSDTTGLTTGDFHGFPSLLIETPFSTAAISLFGGQLVSFVPKGGQD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHCCCCCCC
VMWLSPLAKQPPTPIRGGAPVCWPYFGRQGQIGDVPAHGFVRTVAWRLTESRREDDGTVV
EEEECCHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
LTLTPPRLDDLALRLRMTLRIGRTLEQRLITENTSAAPVRFTQALHNYFRVGDALKISVQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEE
GLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYTNAGGRYTLTDPVLGRRIVIA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEE
TEGSRSLVAWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLTQTISVE
ECCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECC
>Mature Secondary Structure 
TLPRRALPLVLGLLPLAACADPAFDRCLAGLQTQAAAKGVDPAGFQRFTAGLVPDPSVL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
PLLDAQPEFTTPIWDYLASLVDNQRVTDGQAMLVTHRALLTRLSEQTGVDPATIVAVWGV
EEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC
ESDYGRVTGKRPLLVSLATLSCAGRRQPFFRDEFLALLSLLQRGDLAADGLTGSWAGAFG
CCCCCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QTQFMPSTYTRIAVDGDGDGRRDLVASIPDALASTANYLVKAGWERARPWGMEVTLPRGF
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCC
DASKAGRTRRQPLQAWQTAGLLGTDGKPLAPIGLPAETPAALLLPAGATGPAFLVFRNYD
CCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCC
AIYAYNAAESYALSIALLADRLRGGPGLIATWPTDDPGLGRPERRELQQLLLARGYQIGE
EEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
ADGMVGSATRRAIQVEQIRLGLQPADGRPGQRILTALRAAPPLAGVAAVRATAFKLPTAY
CCCCCCHHHHHHHEEEHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PAFAQSAIVHKASPMSDTTGLTTGDFHGFPSLLIETPFSTAAISLFGGQLVSFVPKGGQD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHCCCCCCC
VMWLSPLAKQPPTPIRGGAPVCWPYFGRQGQIGDVPAHGFVRTVAWRLTESRREDDGTVV
EEEECCHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
LTLTPPRLDDLALRLRMTLRIGRTLEQRLITENTSAAPVRFTQALHNYFRVGDALKISVQ
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEE
GLDGLDYLDKYENYATAHRQQGDWSLRDPRDPGRSDRIYTNAGGRYTLTDPVLGRRIVIA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEE
TEGSRSLVAWNPGEEAGKKMADVGDGWRDYVCLEAANAGPDVIELAPGASHTLTQTISVE
ECCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 9298646; 10493123 [H]