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The map label for this gene is yprA [H]

Identifier: 84621802

GI number: 84621802

Start: 146019

End: 148514

Strand: Direct

Name: yprA [H]

Synonym: XOO_0145

Alternate gene names: 84621802

Gene position: 146019-148514 (Clockwise)

Preceding gene: 84621795

Following gene: 84621803

Centisome position: 2.96

GC content: 65.46

Gene sequence:

>2496_bases
ATGCCTCCGTTTGCCCTCGCTCCCCGTACCGAAACCGCCGAACGCGCGCTGGCCACCACCGACGGCCGGCCCAGCCGCGA
TGGCGCGCTGCTCACCGAGCGCCTGGAACGGCGCTACCACGACCGCATCACCGGCAGCTTCACCATTCCCGGGCGCGACG
GCCGCTACGCGCCGATTCCCGAAGATGTGCCCAGCGCACTGGCCGATGCGCTGCAGGCGCGCGGCATCAGCCAGCTCTAC
AGCCATCAGGCCGATGCGTGGGCGGCTACCCAGCGCGGCGAACATGTGGCGATCGTGACGCCCACCGCGTCGGGCAAATC
GCTGTGCTACACGCTGCCGGTGGTGAGCGCAGCAATGACCAGCGGCGCCAAGGCGCTGTACCTGTTCCCGACCAAAGCGC
TGGCGCAGGATCAGGTGGCCGAGTTGCTGGAGTTGAACCGCGCCGGAGAACTGGGCGTGAAAGCCTTCACCTTCGATGGC
GACACGCCCGGCGATGCGCGGCAGGCGATCCGCCTGCATGGCGATATCGTGGTGAGCAACCCGGACATGCTGCATCAGGC
GATCCTGCCGCATCACACCAAGTGGGCGCAGTTCTTCGAGAACCTGCGCTATGTGGTGATCGACGAGATCCACACCTATC
GCGGTGTCTTCGGCAGCCACGTTACCAACGTGCTGCGCCGGCTCAAGCGCATCTGCGCGTTCTATGGCGCCACTCCGCAG
TTCATTCTGTGCTCGGCCACCATCGGCAACCCGCAGGCGCACGCGCAGGCCCTGATCGAAGAACAGGTGCATGCGATCAC
CGAATCCGGCGCGCCCACTGGCGACAAGCATGTGCTGTTGTGGAACCCGCCGGTGGTCAATGCGGATCTGGGCCTGCGTG
CGTCGGCGCGTTCGCAGAGCAACCGCATTGCGCGCATCGCCATCAAGAGCGGCCTGAAGACGCTGGTGTTCGCACAGACG
CGCCTGATGGTGGAAGTGCTGACCAAGTATCTGAAAGACATCTTCGACCACGACCCGCGCAAGCCGCCCCGCATCCGTGC
GTACCGCGGCGGCTATCTGCCCACCGAGCGCCGTGAGGTGGAGCGCGCGATGCGTGCCGGCACGATCGACGGCATCGTTT
CCACCTCGGCGCTGGAACTGGGCGTGGATATCGGTGCGCTGGACGTGGTGATCCTCAACGGCTACCCCGGCAGCGTGGCC
GCCACATGGCAACGCTTTGGCCGCGCCGGGCGCCGCCAGCAACCGGCATTGGGTGTGCTGGTGGCGAGCTCGCAACCCTT
GGACCAATACGTGGTGCGGCACCCGGACTTCTTCGCCGATGCCTCGCCCGAACATGCGCGCACCGCGCCGGATCAACCGC
TGATTTTGTTCGATCACATCCGCTGCGCCGCGTTCGAATTGCCGTTCATTGCCAGCGAACCGTTCGGGCCGATCGACCCG
CTGGTGTTCCTGGAAGTGCTGGCCGAAAGCGAAGTGATCCACCAGGAAGGCGATCGCTGGGAATGGATCGCCGACAGCTA
CCCGGCCACTGCGGTGAGCCTGCGCTCGGTGGCCGATGGCAACTTCGTGGTGGTGGACAAGAGCGACGGCAAGCAGCAGA
TCATCGCCGAGGTGGATTATTCGGCCGCTGCACTCACCTTGTACGAGGGCGCCATCCACATGGTGCAGAGCAGGCCGTAC
CAGGTGGAGCGGCTGGATTGGGCAGGCCGCAAGGCCTACGTGACGCGCACGCATGTGGACTACTACACCGACAGCATCGA
CTACACCAAATTGAAGGTGCTGGACCGCTTCGATGGCGGCGTGGCCGGCCGTGGTGACTCGCATCATGGCGAAGTGCATG
TGGTGCGGCGCGTGTCCGGCTATAAAAAGATTCGTTACTACACGCATGAAAACATCGGCTACGGGCCGGTGAATCTTCCG
GATCAGGAACTGCACACCACCGCGGTGTGGTGGCAGTTGCCGCAGGCGACCTTGGGCAAGGCCTTCGCGTCCAAGCAGGA
TGCGCTGGATGGTTTCCTGGGTGCTGCGTATGCGCTGCATGTGGTGGCCACGGTGGCGGTGATGGCCGACGCGCGCGATC
TGCAAAAGGCCGTGGGCAATGGCGACGGCGCGTGGTGTGCGGTGGCCGACCAGACCGGGCGCGGGCAACTGCGCGGCGTG
GAAGAAGGCGAGACCGCCACGGTGGAATTGCTTCAGACCTTCGTGCCCACGGTGTATCTGTACGACAACTTCCCCGGTGG
CGTGGGCTTGAGCGAGCCACTGTGGCTGCGCCAGGCCGAGCTGCTGCAACGCGCGGACGAGTTGGTGCGGCGTTGCGATT
GCAGCGCCGGTTGCCCGGCCTGCGTGGGCCCGGTGCTGGCCGCACACGAGGAAGGCAAAGGCGACTCGCCCAAGTCGTTG
GCGTTGACGGTGCTGGCATTGTTGTTCGATGCACAGGCGCCGTTGCGGCATGCCACGCAGGTGGACGACGACCTCGCTCT
GGACGTGCCTGCATGA

Upstream 100 bases:

>100_bases
GCTGAATCCGCTCAGTGAGGCAGGCTGGGCGCGGGGGCGCCGGTCTCATACCCTGAGACATCCTTTTCGTTTGATCTCCC
TCTTTGGGAGCCTTTGCCGT

Downstream 100 bases:

>100_bases
GTGTGAGTGCGGACCGGCTGCGCTTGTTGCGGCGTCAGGCCGGGCATGCGGATGTGCCTGCGCCTGTGCTGGCTGATGGT
GGCGATGTACTGCAAGGTGC

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 831; Mature: 830

Protein sequence:

>831_residues
MPPFALAPRTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGRDGRYAPIPEDVPSALADALQARGISQLY
SHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMTSGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDG
DTPGDARQAIRLHGDIVVSNPDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGATPQ
FILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQSNRIARIAIKSGLKTLVFAQT
RLMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERREVERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVA
ATWQRFGRAGRRQQPALGVLVASSQPLDQYVVRHPDFFADASPEHARTAPDQPLILFDHIRCAAFELPFIASEPFGPIDP
LVFLEVLAESEVIHQEGDRWEWIADSYPATAVSLRSVADGNFVVVDKSDGKQQIIAEVDYSAAALTLYEGAIHMVQSRPY
QVERLDWAGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGGVAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLP
DQELHTTAVWWQLPQATLGKAFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWCAVADQTGRGQLRGV
EEGETATVELLQTFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCSAGCPACVGPVLAAHEEGKGDSPKSL
ALTVLALLFDAQAPLRHATQVDDDLALDVPA

Sequences:

>Translated_831_residues
MPPFALAPRTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGRDGRYAPIPEDVPSALADALQARGISQLY
SHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMTSGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDG
DTPGDARQAIRLHGDIVVSNPDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGATPQ
FILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQSNRIARIAIKSGLKTLVFAQT
RLMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERREVERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVA
ATWQRFGRAGRRQQPALGVLVASSQPLDQYVVRHPDFFADASPEHARTAPDQPLILFDHIRCAAFELPFIASEPFGPIDP
LVFLEVLAESEVIHQEGDRWEWIADSYPATAVSLRSVADGNFVVVDKSDGKQQIIAEVDYSAAALTLYEGAIHMVQSRPY
QVERLDWAGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGGVAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLP
DQELHTTAVWWQLPQATLGKAFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWCAVADQTGRGQLRGV
EEGETATVELLQTFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCSAGCPACVGPVLAAHEEGKGDSPKSL
ALTVLALLFDAQAPLRHATQVDDDLALDVPA
>Mature_830_residues
PPFALAPRTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGRDGRYAPIPEDVPSALADALQARGISQLYS
HQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMTSGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDGD
TPGDARQAIRLHGDIVVSNPDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGATPQF
ILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQSNRIARIAIKSGLKTLVFAQTR
LMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERREVERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAA
TWQRFGRAGRRQQPALGVLVASSQPLDQYVVRHPDFFADASPEHARTAPDQPLILFDHIRCAAFELPFIASEPFGPIDPL
VFLEVLAESEVIHQEGDRWEWIADSYPATAVSLRSVADGNFVVVDKSDGKQQIIAEVDYSAAALTLYEGAIHMVQSRPYQ
VERLDWAGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGGVAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLPD
QELHTTAVWWQLPQATLGKAFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWCAVADQTGRGQLRGVE
EGETATVELLQTFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCSAGCPACVGPVLAAHEEGKGDSPKSLA
LTVLALLFDAQAPLRHATQVDDDLALDVPA

Specific function: Unknown

COG id: COG1205

COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=413, Percent_Identity=26.634382566586, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6320497, Length=761, Percent_Identity=32.0630749014455, Blast_Score=372, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR018973
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021 [H]

Pfam domain/function: PF00270 DEAD; PF09369 DUF1998; PF00271 Helicase_C [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 90837; Mature: 90706

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPFALAPRTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGRDGRYAPIP
CCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
EDVPSALADALQARGISQLYSHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMT
HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHH
SGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDGDTPGDARQAIRLHGDIVVSN
CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHEEECCEEECC
PDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGATPQ
HHHHHHHHCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQS
EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCCCCC
NRIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERREV
CCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH
ERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAATWQRFGRAGRRQQPALGVL
HHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEE
VASSQPLDQYVVRHPDFFADASPEHARTAPDQPLILFDHIRCAAFELPFIASEPFGPIDP
EECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCEEHHEECCCCCCCCCCCCCH
LVFLEVLAESEVIHQEGDRWEWIADSYPATAVSLRSVADGNFVVVDKSDGKQQIIAEVDY
HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHEECCC
SAAALTLYEGAIHMVQSRPYQVERLDWAGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGG
CHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHCCCC
VAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLPDQELHTTAVWWQLPQATLGK
CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHEEEEEEECCHHHHHH
AFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWCAVADQTGRGQLRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
EEGETATVELLQTFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCSAGCPA
CCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
CVGPVLAAHEEGKGDSPKSLALTVLALLFDAQAPLRHATQVDDDLALDVPA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEECCCC
>Mature Secondary Structure 
PPFALAPRTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGRDGRYAPIP
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
EDVPSALADALQARGISQLYSHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMT
HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHH
SGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDGDTPGDARQAIRLHGDIVVSN
CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHEEECCEEECC
PDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGATPQ
HHHHHHHHCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQS
EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCCCCC
NRIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERREV
CCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH
ERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAATWQRFGRAGRRQQPALGVL
HHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEE
VASSQPLDQYVVRHPDFFADASPEHARTAPDQPLILFDHIRCAAFELPFIASEPFGPIDP
EECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCEEHHEECCCCCCCCCCCCCH
LVFLEVLAESEVIHQEGDRWEWIADSYPATAVSLRSVADGNFVVVDKSDGKQQIIAEVDY
HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHEECCC
SAAALTLYEGAIHMVQSRPYQVERLDWAGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGG
CHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHCCCC
VAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLPDQELHTTAVWWQLPQATLGK
CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHEEEEEEECCHHHHHH
AFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWCAVADQTGRGQLRGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
EEGETATVELLQTFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCSAGCPA
CCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
CVGPVLAAHEEGKGDSPKSLALTVLALLFDAQAPLRHATQVDDDLALDVPA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]