| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621803
Identifier: 84621803
GI number: 84621803
Start: 148638
End: 149132
Strand: Direct
Name: 84621803
Synonym: XOO_0146
Alternate gene names: NA
Gene position: 148638-149132 (Clockwise)
Preceding gene: 84621802
Following gene: 84621804
Centisome position: 3.01
GC content: 66.46
Gene sequence:
>495_bases ATGCAGATGCCACGCATGTGGGTGAGGTGCCGCAGCCAGCTTCAAATGGAGTTCTGCCTGGCACGTCGCCCGCACCGGTG GCGCATGCGGTCGCAAGTTCGGAGGCGGCCGATGTGCACGAGCGTGCGCAGGTGTTGCAGTCAACGGATGGCCTGCGTTC GCCCGATGCGGGGCACGCTGTTGATGCATTGCGTGTCGATACGCCGACGACCACGCGGATCGGCGCGAAAGATGCGACGT CGTCGTCGGCAAGCGAACGCGCGACGTGGCCGTCTGTGCCGCAGCTGCATCGCGCAATGGTCAGGCGACCAACCGTTGAT ACGGCTAGCGTTGGCGCTGTTGCAGGCGGTACGCGGATGGGTGCCGAAAGCGCCCTGCCTTCGGCGAGTCAGCCACTGCA GCCAACACAAGACCCAGCAACGCCTGCGCCTGCCAGTGCGCCGGGCGTCAGCGCGGAACGTCTACGCCTGCTGCGGCGTC AGATCGGTGGGCTGA
Upstream 100 bases:
>100_bases TTGTTGCGGCGTCAGGCCGGGCATGCGGATGTGCCTGCGCCTGTGCTGGCTGATGGTGGCGATGTACTGCAAGGTGCGGC GACGGTGCATGCCAAGAAGC
Downstream 100 bases:
>100_bases CGCCTGCAGCGCGCAAGGACGATGCGGCAATGCCGACACGGGCGCAGCGGGCGACGGTTTCCAGCGCCGCGTCACCTGTG GCACGCTCGCCTTCACGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MQMPRMWVRCRSQLQMEFCLARRPHRWRMRSQVRRRPMCTSVRRCCSQRMACVRPMRGTLLMHCVSIRRRPRGSARKMRR RRRQANARRGRLCRSCIAQWSGDQPLIRLALALLQAVRGWVPKAPCLRRVSHCSQHKTQQRLRLPVRRASARNVYACCGV RSVG
Sequences:
>Translated_164_residues MQMPRMWVRCRSQLQMEFCLARRPHRWRMRSQVRRRPMCTSVRRCCSQRMACVRPMRGTLLMHCVSIRRRPRGSARKMRR RRRQANARRGRLCRSCIAQWSGDQPLIRLALALLQAVRGWVPKAPCLRRVSHCSQHKTQQRLRLPVRRASARNVYACCGV RSVG >Mature_164_residues MQMPRMWVRCRSQLQMEFCLARRPHRWRMRSQVRRRPMCTSVRRCCSQRMACVRPMRGTLLMHCVSIRRRPRGSARKMRR RRRQANARRGRLCRSCIAQWSGDQPLIRLALALLQAVRGWVPKAPCLRRVSHCSQHKTQQRLRLPVRRASARNVYACCGV RSVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19463; Mature: 19463
Theoretical pI: Translated: 12.63; Mature: 12.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.9 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 14.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMPRMWVRCRSQLQMEFCLARRPHRWRMRSQVRRRPMCTSVRRCCSQRMACVRPMRGTL CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LMHCVSIRRRPRGSARKMRRRRRQANARRGRLCRSCIAQWSGDQPLIRLALALLQAVRGW HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC VPKAPCLRRVSHCSQHKTQQRLRLPVRRASARNVYACCGVRSVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure MQMPRMWVRCRSQLQMEFCLARRPHRWRMRSQVRRRPMCTSVRRCCSQRMACVRPMRGTL CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LMHCVSIRRRPRGSARKMRRRRRQANARRGRLCRSCIAQWSGDQPLIRLALALLQAVRGW HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC VPKAPCLRRVSHCSQHKTQQRLRLPVRRASARNVYACCGVRSVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA