| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is macB [H]
Identifier: 84621795
GI number: 84621795
Start: 140567
End: 141877
Strand: Direct
Name: macB [H]
Synonym: XOO_0138
Alternate gene names: 84621795
Gene position: 140567-141877 (Clockwise)
Preceding gene: 84621794
Following gene: 84621802
Centisome position: 2.85
GC content: 66.97
Gene sequence:
>1311_bases ATGAAGAAGCATTGGTTGGGCAACGCGCTGTCGATCCTGCTGATGGTGGTGGGCCTGGGCGTGTGGATCGCGCTGCCATG GATCGGCGTGCTGGCGGTGGCTGTGGCGCTAATGCTGTGGCTGCTGCTGACCCGCAGCGGTCGGCTATCGCTGGCTGCCG CGCGCATCGGCATCGCCAGCCTTCCGCAGCGCTGGGGCGCGAGTTCGGTGATCGTGGTCGGCATCGCCGGTGTGGTCGGC GTGCTGGTGGCGATGTTGGCGATGGGACGCGGTTTTGAAGTCACGCTCAACAGCACCGGCGACGACACCACGGCGATCGT GCTGCGCGGCGGTTCGCAGGCGGAGACCAACTCAGTGATCACCCGCGACTTGGTGCCTCTGGTCAGCGCGCTACCCGGCA TCGCCAAGGACGTGCAGGGTCGCGCGATGATCTCGCCGGAGCTGTCGCAGGTGGTCAACCTGGTCTCCAAGTCCGACGGC ACCGACGTGAATGCGCAGTTCCGCGGCGTCGGCGAGCAGGGTTGGGCGGTGCACGACAAGGTTAAGATCGTCGATGGCCG GCGCTTCGGCACCGGCCTGCGCGAGATCGTGGTCGGCAAGGGCGCGCAGAACCAGTTCCGCGGGCTGGATGTCGGCAGAA CGCTGAGCCTGGGCAACCAGACCTGGACCGTGGTCGGCGTGTTCGCTTCCGGCGATGCGCACGATTCGGAGCTGTGGACC GATGCGCAGACCCTGGCCAGCACCTACCAGCGCAGCGCCTGGCAGTCGATCAGCGCGCGCACCGAGGGCAAGGCCGGCTT CGACCGGTTCAGGGCCGCGATGGCCGCCGACCCACGGCTCAAGCTCGACGTCGATACCACGCGCAGCTACTACGGCAAGC AGGGCGGCGGGCTGAGCAAGCTGATCGGTATCCTCGGCACGGTGATCGGCGCGATCATGGCGGTCGGTGCGGTGTTCGGC GCACTCAACACCATGTACGCGGCGGTGGCCACGCGTGTACGGGAGATTGCCACGATGCGCGCGCTTGGCTTCCGCAGTAC GCCGGTGGTGATGGCGGTGATGCTGGAGACAATGCTGCTGGCGCTGCTCGGCGGCGTACTGGGTGGCGCGATTGCATGGG CGGTGTTCAACGGCTACAGCGTGTCCACACTGGGCAGCAACTTCAGCCAGGTGGTGTTCCAGTTCAAGGTCTCGCCGGAG TTGCTGTGGAGCGGGCTGAAGTGGGCGCTGGGAATCGGGCTGGTCGGCGGCCTGTTTCCTGCCCTGCGTGCTGCACGGCT GCCGATTACCACCGCACTGCGCGAGGTATGA
Upstream 100 bases:
>100_bases GATCGTGGTGATCGGCGTGGTAGTCGGCGTGCTGCCGGCGCTACGCGCGAAGCGTCTGAAGATCGTCGATGCCCTGGCTG GGCGCTGAGAGGAGATCGAC
Downstream 100 bases:
>100_bases GGTAGGGCAGTCTCAAGATTCAAGTGCAACACGTGATTTGAGTGCTGCGATTTCTTCCTCCATTGCCTCGCTTGGTGTCT TCCATCCGAGCGTCTGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKKHWLGNALSILLMVVGLGVWIALPWIGVLAVAVALMLWLLLTRSGRLSLAAARIGIASLPQRWGASSVIVVGIAGVVG VLVAMLAMGRGFEVTLNSTGDDTTAIVLRGGSQAETNSVITRDLVPLVSALPGIAKDVQGRAMISPELSQVVNLVSKSDG TDVNAQFRGVGEQGWAVHDKVKIVDGRRFGTGLREIVVGKGAQNQFRGLDVGRTLSLGNQTWTVVGVFASGDAHDSELWT DAQTLASTYQRSAWQSISARTEGKAGFDRFRAAMAADPRLKLDVDTTRSYYGKQGGGLSKLIGILGTVIGAIMAVGAVFG ALNTMYAAVATRVREIATMRALGFRSTPVVMAVMLETMLLALLGGVLGGAIAWAVFNGYSVSTLGSNFSQVVFQFKVSPE LLWSGLKWALGIGLVGGLFPALRAARLPITTALREV
Sequences:
>Translated_436_residues MKKHWLGNALSILLMVVGLGVWIALPWIGVLAVAVALMLWLLLTRSGRLSLAAARIGIASLPQRWGASSVIVVGIAGVVG VLVAMLAMGRGFEVTLNSTGDDTTAIVLRGGSQAETNSVITRDLVPLVSALPGIAKDVQGRAMISPELSQVVNLVSKSDG TDVNAQFRGVGEQGWAVHDKVKIVDGRRFGTGLREIVVGKGAQNQFRGLDVGRTLSLGNQTWTVVGVFASGDAHDSELWT DAQTLASTYQRSAWQSISARTEGKAGFDRFRAAMAADPRLKLDVDTTRSYYGKQGGGLSKLIGILGTVIGAIMAVGAVFG ALNTMYAAVATRVREIATMRALGFRSTPVVMAVMLETMLLALLGGVLGGAIAWAVFNGYSVSTLGSNFSQVVFQFKVSPE LLWSGLKWALGIGLVGGLFPALRAARLPITTALREV >Mature_436_residues MKKHWLGNALSILLMVVGLGVWIALPWIGVLAVAVALMLWLLLTRSGRLSLAAARIGIASLPQRWGASSVIVVGIAGVVG VLVAMLAMGRGFEVTLNSTGDDTTAIVLRGGSQAETNSVITRDLVPLVSALPGIAKDVQGRAMISPELSQVVNLVSKSDG TDVNAQFRGVGEQGWAVHDKVKIVDGRRFGTGLREIVVGKGAQNQFRGLDVGRTLSLGNQTWTVVGVFASGDAHDSELWT DAQTLASTYQRSAWQSISARTEGKAGFDRFRAAMAADPRLKLDVDTTRSYYGKQGGGLSKLIGILGTVIGAIMAVGAVFG ALNTMYAAVATRVREIATMRALGFRSTPVVMAVMLETMLLALLGGVLGGAIAWAVFNGYSVSTLGSNFSQVVFQFKVSPE LLWSGLKWALGIGLVGGLFPALRAARLPITTALREV
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 45917; Mature: 45917
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHWLGNALSILLMVVGLGVWIALPWIGVLAVAVALMLWLLLTRSGRLSLAAARIGIAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LPQRWGASSVIVVGIAGVVGVLVAMLAMGRGFEVTLNSTGDDTTAIVLRGGSQAETNSVI CHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHH TRDLVPLVSALPGIAKDVQGRAMISPELSQVVNLVSKSDGTDVNAQFRGVGEQGWAVHDK HHHHHHHHHHCCCHHHHCCCCEEECHHHHHHHHHHHCCCCCCCCHHEECCCCCCCEECCE VKIVDGRRFGTGLREIVVGKGAQNQFRGLDVGRTLSLGNQTWTVVGVFASGDAHDSELWT EEEECCCHHCCCHHHHHHCCCCCCHHCCCCCCCEEECCCCEEEEEEEEECCCCCCHHHHH DAQTLASTYQRSAWQSISARTEGKAGFDRFRAAMAADPRLKLDVDTTRSYYGKQGGGLSK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCHHH LIGILGTVIGAIMAVGAVFGALNTMYAAVATRVREIATMRALGFRSTPVVMAVMLETMLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALLGGVLGGAIAWAVFNGYSVSTLGSNFSQVVFQFKVSPELLWSGLKWALGIGLVGGLFP HHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHH ALRAARLPITTALREV HHHHHCCCHHHHHHCC >Mature Secondary Structure MKKHWLGNALSILLMVVGLGVWIALPWIGVLAVAVALMLWLLLTRSGRLSLAAARIGIAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LPQRWGASSVIVVGIAGVVGVLVAMLAMGRGFEVTLNSTGDDTTAIVLRGGSQAETNSVI CHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHH TRDLVPLVSALPGIAKDVQGRAMISPELSQVVNLVSKSDGTDVNAQFRGVGEQGWAVHDK HHHHHHHHHHCCCHHHHCCCCEEECHHHHHHHHHHHCCCCCCCCHHEECCCCCCCEECCE VKIVDGRRFGTGLREIVVGKGAQNQFRGLDVGRTLSLGNQTWTVVGVFASGDAHDSELWT EEEECCCHHCCCHHHHHHCCCCCCHHCCCCCCCEEECCCCEEEEEEEEECCCCCCHHHHH DAQTLASTYQRSAWQSISARTEGKAGFDRFRAAMAADPRLKLDVDTTRSYYGKQGGGLSK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCHHH LIGILGTVIGAIMAVGAVFGALNTMYAAVATRVREIATMRALGFRSTPVVMAVMLETMLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALLGGVLGGAIAWAVFNGYSVSTLGSNFSQVVFQFKVSPELLWSGLKWALGIGLVGGLFP HHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHH ALRAARLPITTALREV HHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]