| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is rmlA2 [C]
Identifier: 84490289
GI number: 84490289
Start: 1692236
End: 1693261
Strand: Direct
Name: rmlA2 [C]
Synonym: Msp_1509
Alternate gene names: 84490289
Gene position: 1692236-1693261 (Clockwise)
Preceding gene: 84490288
Following gene: 84490290
Centisome position: 95.75
GC content: 29.73
Gene sequence:
>1026_bases ATGAAAGACACAGTGGGAATGATACTATGTGGTGGTTTTGGAAAAAGATTAAGACCTGTAACTGAAACAGTACCTAAACC ATTAGTAGAACTAAAAGAAGATTACACAATACTTGATAAACAAATATTTGACTTTAAAAGTGCAGGAGTTAATAAAGTAA TATTATTGACTGGATTCCTTGGAGAAAAAATAGAAGAACGTTATGGTAATGAATATATGGGCGTTACAATTGAATATGTT AAAGAAGAAAAACCTCTTGGAACACTAAATGCCATACGTTTAGGAATGGAACACATGGATGATAACACACAATGTGTAAT AAGAAACGGAGATGTTGTTGCAGATTTAAGTATTAAAAAAATGATAGAAGATGGTGAAAAATCACCATTTGATTTCACAA TATTTGTAACACAAATGACATCACCTTATGGTATAGTTGAATTAAGTGGAGATAAAATAGTATTATTCAAGGAAAAACCA TTACTTGATTACTATATAAATGGTGGAATATACTTTTCAAAAGGTAAGTTAGACTTCGGATCATATAAAACAGGAGATAT TGAAAAAACAATATTCCCTGAATTAGCAAAAGATAAGAAACTTGGATATTATAAGGAAAATGGTTTATTTTGGATGGCAG TAGACACGTCAAAAGAATTACAGCAAGTACAAAATGAATATAAAAACAGAGAAGATAAGCCATGGGGATATGAGAAAGTA CTTATATATACTGATAAATATCTTACAAAAGAATTATTTATTAAAGAAGGTTATCAGACAAGCTTCCACTATCATCCAAA TAAAGATGAAACAATGTACATTGTAAGTGGAAAAGGTTACATAGAATTTGAAGACAAAAAAGAATATTTTGGAGCAAAGG ATACTGTAAGAATAGAACCACAAACACCACATACTATTGTTGCTATAGAAAACACAGTATTACATGAAGTATCTACACCA GACTTAGATGATACAATTAGAATAAAAGATTTCTATGATTCACAAACACCTAGTGGTAAAAGATAG
Upstream 100 bases:
>100_bases TTATTATAAAAAAAAGAAGTTTAAATAGTAAAAAATATTTTTATATAAAGTATTTTATAATATAAAAAAAAATATTACTA AAATAAACAGAGTGATCCAA
Downstream 100 bases:
>100_bases ATTGAATCTATCTTAAAAATTCTTTTTTACTTTTTTTAAAATTATTTATGGAGACGTGGTTTTATTAGTAATATAACTAT TATTGATTATGGCAGTGGAA
Product: sugar phosphate nucleotidyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKDTVGMILCGGFGKRLRPVTETVPKPLVELKEDYTILDKQIFDFKSAGVNKVILLTGFLGEKIEERYGNEYMGVTIEYV KEEKPLGTLNAIRLGMEHMDDNTQCVIRNGDVVADLSIKKMIEDGEKSPFDFTIFVTQMTSPYGIVELSGDKIVLFKEKP LLDYYINGGIYFSKGKLDFGSYKTGDIEKTIFPELAKDKKLGYYKENGLFWMAVDTSKELQQVQNEYKNREDKPWGYEKV LIYTDKYLTKELFIKEGYQTSFHYHPNKDETMYIVSGKGYIEFEDKKEYFGAKDTVRIEPQTPHTIVAIENTVLHEVSTP DLDDTIRIKDFYDSQTPSGKR
Sequences:
>Translated_341_residues MKDTVGMILCGGFGKRLRPVTETVPKPLVELKEDYTILDKQIFDFKSAGVNKVILLTGFLGEKIEERYGNEYMGVTIEYV KEEKPLGTLNAIRLGMEHMDDNTQCVIRNGDVVADLSIKKMIEDGEKSPFDFTIFVTQMTSPYGIVELSGDKIVLFKEKP LLDYYINGGIYFSKGKLDFGSYKTGDIEKTIFPELAKDKKLGYYKENGLFWMAVDTSKELQQVQNEYKNREDKPWGYEKV LIYTDKYLTKELFIKEGYQTSFHYHPNKDETMYIVSGKGYIEFEDKKEYFGAKDTVRIEPQTPHTIVAIENTVLHEVSTP DLDDTIRIKDFYDSQTPSGKR >Mature_341_residues MKDTVGMILCGGFGKRLRPVTETVPKPLVELKEDYTILDKQIFDFKSAGVNKVILLTGFLGEKIEERYGNEYMGVTIEYV KEEKPLGTLNAIRLGMEHMDDNTQCVIRNGDVVADLSIKKMIEDGEKSPFDFTIFVTQMTSPYGIVELSGDKIVLFKEKP LLDYYINGGIYFSKGKLDFGSYKTGDIEKTIFPELAKDKKLGYYKENGLFWMAVDTSKELQQVQNEYKNREDKPWGYEKV LIYTDKYLTKELFIKEGYQTSFHYHPNKDETMYIVSGKGYIEFEDKKEYFGAKDTVRIEPQTPHTIVAIENTVLHEVSTP DLDDTIRIKDFYDSQTPSGKR
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=224, Percent_Identity=32.1428571428571, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI11761619, Length=224, Percent_Identity=32.1428571428571, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI133931050, Length=234, Percent_Identity=35.042735042735, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320148, Length=240, Percent_Identity=33.75, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI21355443, Length=225, Percent_Identity=32.8888888888889, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644084, Length=225, Percent_Identity=32.8888888888889, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 39251; Mature: 39251
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTVGMILCGGFGKRLRPVTETVPKPLVELKEDYTILDKQIFDFKSAGVNKVILLTGFL CCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEECHH GEKIEERYGNEYMGVTIEYVKEEKPLGTLNAIRLGMEHMDDNTQCVIRNGDVVADLSIKK HHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHH MIEDGEKSPFDFTIFVTQMTSPYGIVELSGDKIVLFKEKPLLDYYINGGIYFSKGKLDFG HHHCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEECCCCEEEEECCCEEEECCCCCCC SYKTGDIEKTIFPELAKDKKLGYYKENGLFWMAVDTSKELQQVQNEYKNREDKPWGYEKV CCCCCCCCHHHHHHHHCCCCCCEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEE LIYTDKYLTKELFIKEGYQTSFHYHPNKDETMYIVSGKGYIEFEDKKEYFGAKDTVRIEP EEEECCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEECCCHHHCCCCCEEEECC QTPHTIVAIENTVLHEVSTPDLDDTIRIKDFYDSQTPSGKR CCCEEEEEEECEEEEECCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKDTVGMILCGGFGKRLRPVTETVPKPLVELKEDYTILDKQIFDFKSAGVNKVILLTGFL CCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEECHH GEKIEERYGNEYMGVTIEYVKEEKPLGTLNAIRLGMEHMDDNTQCVIRNGDVVADLSIKK HHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHH MIEDGEKSPFDFTIFVTQMTSPYGIVELSGDKIVLFKEKPLLDYYINGGIYFSKGKLDFG HHHCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEECCCCEEEEECCCEEEECCCCCCC SYKTGDIEKTIFPELAKDKKLGYYKENGLFWMAVDTSKELQQVQNEYKNREDKPWGYEKV CCCCCCCCHHHHHHHHCCCCCCEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEE LIYTDKYLTKELFIKEGYQTSFHYHPNKDETMYIVSGKGYIEFEDKKEYFGAKDTVRIEP EEEECCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEECCCHHHCCCCCEEEECC QTPHTIVAIENTVLHEVSTPDLDDTIRIKDFYDSQTPSGKR CCCEEEEEEECEEEEECCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA