| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490288
Identifier: 84490288
GI number: 84490288
Start: 1691324
End: 1691704
Strand: Direct
Name: 84490288
Synonym: Msp_1508
Alternate gene names: NA
Gene position: 1691324-1691704 (Clockwise)
Preceding gene: 84490287
Following gene: 84490289
Centisome position: 95.7
GC content: 29.13
Gene sequence:
>381_bases ATGAAGCTTAGTCCTTTACAAACTATTGTTTTTATAGTAATATTAGCAGGAATAGCATATGGTGCATACAGTGCAACAAT AGATCAATTACCTGATGTTTCAGGTACTGTTGTTGGTAACACAACAGTTAATAACAGTACAAATCCAACAATAGGAACAG TTTACTTATATGATGATACAAATAATTCTTCAAATACATCAGTTATAATTAGAAAAAACACTAAAATATACAAGGAAGAT AAAAATGGTAAACAAACCTCTGTAAATATGTCTAGCATAAAAAATGGTTGTAAAATTGATGTTTATACAGTAGGTGACCC TACAAATACCATTCCACCCCAAGTAATCTCTGAAAGAATTGTTATTAAGGCTAAAAAATAA
Upstream 100 bases:
>100_bases TGGTAATTTAGATGATTGAAAAAAAATAGATAATTTATAAAATATTTATAAGTTAAAAAATACATAATAATTATTAAAAA AAATATAAAGAGTATATTTT
Downstream 100 bases:
>100_bases ACTCCACCCTTTTTTTATTTTTATTGAAAATAATTCCATTAAATAGCTAGTTTCTAATAAAATTTCAGACTAAAAAAAAA TAAATTGAAGTAGACTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKLSPLQTIVFIVILAGIAYGAYSATIDQLPDVSGTVVGNTTVNNSTNPTIGTVYLYDDTNNSSNTSVIIRKNTKIYKED KNGKQTSVNMSSIKNGCKIDVYTVGDPTNTIPPQVISERIVIKAKK
Sequences:
>Translated_126_residues MKLSPLQTIVFIVILAGIAYGAYSATIDQLPDVSGTVVGNTTVNNSTNPTIGTVYLYDDTNNSSNTSVIIRKNTKIYKED KNGKQTSVNMSSIKNGCKIDVYTVGDPTNTIPPQVISERIVIKAKK >Mature_126_residues MKLSPLQTIVFIVILAGIAYGAYSATIDQLPDVSGTVVGNTTVNNSTNPTIGTVYLYDDTNNSSNTSVIIRKNTKIYKED KNGKQTSVNMSSIKNGCKIDVYTVGDPTNTIPPQVISERIVIKAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13599; Mature: 13599
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSPLQTIVFIVILAGIAYGAYSATIDQLPDVSGTVVGNTTVNNSTNPTIGTVYLYDDT CCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCEECCCCCCCEEEEEEEECC NNSSNTSVIIRKNTKIYKEDKNGKQTSVNMSSIKNGCKIDVYTVGDPTNTIPPQVISERI CCCCCCEEEEEECCEEEEECCCCCEEEEEHHHCCCCCEEEEEECCCCCCCCCHHHCCCEE VIKAKK EEEECC >Mature Secondary Structure MKLSPLQTIVFIVILAGIAYGAYSATIDQLPDVSGTVVGNTTVNNSTNPTIGTVYLYDDT CCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECCEECCCCCCCEEEEEEEECC NNSSNTSVIIRKNTKIYKEDKNGKQTSVNMSSIKNGCKIDVYTVGDPTNTIPPQVISERI CCCCCCEEEEEECCEEEEECCCCCEEEEEHHHCCCCCEEEEEECCCCCCCCCHHHCCCEE VIKAKK EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA