| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is hisH
Identifier: 84490290
GI number: 84490290
Start: 1693487
End: 1693945
Strand: Direct
Name: hisH
Synonym: Msp_1510
Alternate gene names: 84490290
Gene position: 1693487-1693945 (Clockwise)
Preceding gene: 84490289
Following gene: 84490291
Centisome position: 95.82
GC content: 29.41
Gene sequence:
>459_bases ATGAAGAATCTTGTTAAGTATAAGGACGTTGTATATAATCATATAGATGATGATAAACCTTTACTAGGAATCTGTTTAGG ATTACATATGCTTTTTTCTAGTAGTCAGGAGAGTCCTGATATTAAGGGGTTGGATATATTTAATGGTAGTGCAAAGAAAT TTAACTTACCTCCAGAATATAAAATACCTCATATGGGATGGAATACTATAGAAGTAAATGATACTACTTCAAATAACACT ACTCTTCTATCTGAAGCTGACAATAACTATATGTACTTTGTTCATTCATATTATATTGACCCTGAGGATAAAAATATAAT AACTGCATATACTGATTATGGTGGAAAAATTCCAGTTGCTATTGGAAAGAATAATATTCATGCACTACAATTCCATCCAG AAAAAAGTGGAAAAGCAGGATTAAATATTCTACGTAAATTTATAAACACCATAGATTAA
Upstream 100 bases:
>100_bases AAAACGTTTAAATGTTGAAGTAAAAGTATCTTCTGATATAAATGAAATTAAAACTTCTGATGCATTAATATTACCAGGAG TAGGTGCATTTGGTGCAGTT
Downstream 100 bases:
>100_bases CCACCTTTTCTTCTTATTTTTTATAATATTAGAAATTAATATAATAATAACAAAGTATGATATATAGATATAATCATACA AATTTTATGAAAATTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKNLVKYKDVVYNHIDDDKPLLGICLGLHMLFSSSQESPDIKGLDIFNGSAKKFNLPPEYKIPHMGWNTIEVNDTTSNNT TLLSEADNNYMYFVHSYYIDPEDKNIITAYTDYGGKIPVAIGKNNIHALQFHPEKSGKAGLNILRKFINTID
Sequences:
>Translated_152_residues MKNLVKYKDVVYNHIDDDKPLLGICLGLHMLFSSSQESPDIKGLDIFNGSAKKFNLPPEYKIPHMGWNTIEVNDTTSNNT TLLSEADNNYMYFVHSYYIDPEDKNIITAYTDYGGKIPVAIGKNNIHALQFHPEKSGKAGLNILRKFINTID >Mature_152_residues MKNLVKYKDVVYNHIDDDKPLLGICLGLHMLFSSSQESPDIKGLDIFNGSAKKFNLPPEYKIPHMGWNTIEVNDTTSNNT TLLSEADNNYMYFVHSYYIDPEDKNIITAYTDYGGKIPVAIGKNNIHALQFHPEKSGKAGLNILRKFINTID
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=133, Percent_Identity=37.593984962406, Blast_Score=88, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319725, Length=151, Percent_Identity=36.4238410596026, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 17211; Mature: 17211
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLVKYKDVVYNHIDDDKPLLGICLGLHMLFSSSQESPDIKGLDIFNGSAKKFNLPPEY CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCC KIPHMGWNTIEVNDTTSNNTTLLSEADNNYMYFVHSYYIDPEDKNIITAYTDYGGKIPVA CCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEE IGKNNIHALQFHPEKSGKAGLNILRKFINTID ECCCCEEEEEECCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKNLVKYKDVVYNHIDDDKPLLGICLGLHMLFSSSQESPDIKGLDIFNGSAKKFNLPPEY CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCC KIPHMGWNTIEVNDTTSNNTTLLSEADNNYMYFVHSYYIDPEDKNIITAYTDYGGKIPVA CCCCCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEE IGKNNIHALQFHPEKSGKAGLNILRKFINTID ECCCCEEEEEECCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]