Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489876

Identifier: 84489876

GI number: 84489876

Start: 1222414

End: 1222722

Strand: Direct

Name: 84489876

Synonym: Msp_1082

Alternate gene names: NA

Gene position: 1222414-1222722 (Clockwise)

Preceding gene: 84489871

Following gene: 84489877

Centisome position: 69.16

GC content: 29.13

Gene sequence:

>309_bases
ATGAATACTGAACAAAAAAAACAATTAATAAAAACAGTAGAACAAACAAGTCCCTGGGAGAGAATACCTACCTCTGTTGA
AGGTGTATTTCTTGTAAAAGCCCCTGAACATAAGAATATCCAATCAGTGTTTGTTGAATTAAATCCATCACTTAGAGGAC
AGCCAATTAAAAAAAGAGGCGTTTATCTAAAAAATAGTAATGAATATGAAGCTTTTCAAGAATTATTTAATAATCAAAAA
GTTAAAGAATTATTAGATGTTGTAAGTGAATGTTATGGTAAACAAAGATCTCCACGAATAGAAATATGA

Upstream 100 bases:

>100_bases
CATAAAACTTAGTAATAATTATATTTAACTAAGTAATACTTTTATATTAGTAAATATAAAAATTAAAATACAAAAAGAAA
TAGGTGAAAACTTAGATAAT

Downstream 100 bases:

>100_bases
TTATTTTTCATGTATGACTTCTTTATTAAATTTCATAGATTTAAGTCATACATCTACTTTTTTTTAAATAAAATTATAAA
GAAAAAACTACAGAGTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNTEQKKQLIKTVEQTSPWERIPTSVEGVFLVKAPEHKNIQSVFVELNPSLRGQPIKKRGVYLKNSNEYEAFQELFNNQK
VKELLDVVSECYGKQRSPRIEI

Sequences:

>Translated_102_residues
MNTEQKKQLIKTVEQTSPWERIPTSVEGVFLVKAPEHKNIQSVFVELNPSLRGQPIKKRGVYLKNSNEYEAFQELFNNQK
VKELLDVVSECYGKQRSPRIEI
>Mature_102_residues
MNTEQKKQLIKTVEQTSPWERIPTSVEGVFLVKAPEHKNIQSVFVELNPSLRGQPIKKRGVYLKNSNEYEAFQELFNNQK
VKELLDVVSECYGKQRSPRIEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11876; Mature: 11876

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEQKKQLIKTVEQTSPWERIPTSVEGVFLVKAPEHKNIQSVFVELNPSLRGQPIKKRG
CCHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCHHHHHEECCCCCCCCCCCCCC
VYLKNSNEYEAFQELFNNQKVKELLDVVSECYGKQRSPRIEI
CEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNTEQKKQLIKTVEQTSPWERIPTSVEGVFLVKAPEHKNIQSVFVELNPSLRGQPIKKRG
CCHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCHHHHHEECCCCCCCCCCCCCC
VYLKNSNEYEAFQELFNNQKVKELLDVVSECYGKQRSPRIEI
CEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA