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The map label for this gene is pip [H]

Identifier: 84489862

GI number: 84489862

Start: 1208401

End: 1209735

Strand: Direct

Name: pip [H]

Synonym: Msp_1068

Alternate gene names: 84489862

Gene position: 1208401-1209735 (Clockwise)

Preceding gene: 84489859

Following gene: 84489864

Centisome position: 68.37

GC content: 26.97

Gene sequence:

>1335_bases
ATGATAAAAAATATACAAAAAATCATCAAAGATGATATTTCAGCTGCTTTAAAAAATCCAGTAGTTTTAATTGTATTAAT
CGCATTAATCATACTTCCATCATTATACTCTGTAATAAATATATATGCATGTTGGGATCCATATGAAGATACTGATAACA
TTAATTTTATCATAGTAAATAATGATAATCCAGTTACAGTTAATGGAACAACTTATGCTTATGGAGATATGGTTGTTGAT
GAATTAAAGAATAATTCAAATTTTAATTGGGTTTATAAAGATGAAGATGAAGCTCGAGAATCTCTAAAAAATGGAACAGA
TTATGCAGCCATAATCATACCAGAAGACTTTTCAAAAGACATATTATCAGTTTATTCAGGAAATCCTAAACAAGCAAAGA
TAGAATATCTTGATAATGATAAAACAAGTCCAGTAGCTCCTAAAATAACTTCAAAAGCAGCATCTAATGTAGTAAATGAA
ATTAATAATAAAATACATGAGGAATATAATACTAAAAATTACATTAGTTCTAATCCTGTTCTTCTACAACAAGCACAATC
AAGTCAAACACAAAATACAACTACTGCAAATACTACTAATACAACAGTTACAAACACAAACAATAGTTTAGCTCAATCAA
CTTCAATACAAAATGTTAAAAATTATTTCCATGAACCTACAACTTTAAGTAATTATAGTTACTATGAAGCTGATACTTAT
GGTCAACAAGTATCATCATTCTATACAGTTCTTGCTGCATGGGTTGGTGGTATTATACTAGTAGCATTATTAAGTACAAA
ACCTACAGAAAATAAGGAAAAATACAAACCAATTGAAGTATACTTTGGAAAAATAGGATTATTCTCCATAATGAGTATAT
TACAAGCAATTGTTACATTTATAGCATTGAGTTTATTAGGTATTCCAATGAGTAACAGTGTTTTAATGTTAGGTTGTATG
ATACTAATAGGTTTGTCTTTTACAGCGATAATCTATTCACTAGTATCAGTATTTGGTAATGTAGGTAAAGCTATAGCTTT
AATAATATTAGTATTCCAAATATCTGGAACTAATGGTATTTATCCTATAGAAATTATGTCTACATTATTCCAAACAATAA
TGCCTTACTTACCAATGACATATGCAATTTTAATATTAAAAGATGCTATCTTTGGAGTTGTATGGCCATCATTCATAAGA
AATGTACTTTGTTTAATTATATTCCCACTATGTGCAGTGGCTTTAAGTATTGTAGTTAAAGAAAAATTAGATAAAAGTAG
TAAATTCTTTGAAGAAAAACTTGATGAAAGTAATTTATTTGAATTAAGAAAATAA

Upstream 100 bases:

>100_bases
TGTGATACACTTTAAGATTAATATTATTCTAAATTATTTTCATTTTAAGTACACAAGATAATATTTTTAGAATAAAAAAA
ATAATTTATAAAGTGATTAA

Downstream 100 bases:

>100_bases
TTCAAATATCTTATTATTCTTTTTTTAATATAATGAAACTTTTGAAACACCCTCTATTTTTAATAATAATTGAATTAAAT
CACCATTTACAGGTTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MIKNIQKIIKDDISAALKNPVVLIVLIALIILPSLYSVINIYACWDPYEDTDNINFIIVNNDNPVTVNGTTYAYGDMVVD
ELKNNSNFNWVYKDEDEARESLKNGTDYAAIIIPEDFSKDILSVYSGNPKQAKIEYLDNDKTSPVAPKITSKAASNVVNE
INNKIHEEYNTKNYISSNPVLLQQAQSSQTQNTTTANTTNTTVTNTNNSLAQSTSIQNVKNYFHEPTTLSNYSYYEADTY
GQQVSSFYTVLAAWVGGIILVALLSTKPTENKEKYKPIEVYFGKIGLFSIMSILQAIVTFIALSLLGIPMSNSVLMLGCM
ILIGLSFTAIIYSLVSVFGNVGKAIALIILVFQISGTNGIYPIEIMSTLFQTIMPYLPMTYAILILKDAIFGVVWPSFIR
NVLCLIIFPLCAVALSIVVKEKLDKSSKFFEEKLDESNLFELRK

Sequences:

>Translated_444_residues
MIKNIQKIIKDDISAALKNPVVLIVLIALIILPSLYSVINIYACWDPYEDTDNINFIIVNNDNPVTVNGTTYAYGDMVVD
ELKNNSNFNWVYKDEDEARESLKNGTDYAAIIIPEDFSKDILSVYSGNPKQAKIEYLDNDKTSPVAPKITSKAASNVVNE
INNKIHEEYNTKNYISSNPVLLQQAQSSQTQNTTTANTTNTTVTNTNNSLAQSTSIQNVKNYFHEPTTLSNYSYYEADTY
GQQVSSFYTVLAAWVGGIILVALLSTKPTENKEKYKPIEVYFGKIGLFSIMSILQAIVTFIALSLLGIPMSNSVLMLGCM
ILIGLSFTAIIYSLVSVFGNVGKAIALIILVFQISGTNGIYPIEIMSTLFQTIMPYLPMTYAILILKDAIFGVVWPSFIR
NVLCLIIFPLCAVALSIVVKEKLDKSSKFFEEKLDESNLFELRK
>Mature_444_residues
MIKNIQKIIKDDISAALKNPVVLIVLIALIILPSLYSVINIYACWDPYEDTDNINFIIVNNDNPVTVNGTTYAYGDMVVD
ELKNNSNFNWVYKDEDEARESLKNGTDYAAIIIPEDFSKDILSVYSGNPKQAKIEYLDNDKTSPVAPKITSKAASNVVNE
INNKIHEEYNTKNYISSNPVLLQQAQSSQTQNTTTANTTNTTVTNTNNSLAQSTSIQNVKNYFHEPTTLSNYSYYEADTY
GQQVSSFYTVLAAWVGGIILVALLSTKPTENKEKYKPIEVYFGKIGLFSIMSILQAIVTFIALSLLGIPMSNSVLMLGCM
ILIGLSFTAIIYSLVSVFGNVGKAIALIILVFQISGTNGIYPIEIMSTLFQTIMPYLPMTYAILILKDAIFGVVWPSFIR
NVLCLIIFPLCAVALSIVVKEKLDKSSKFFEEKLDESNLFELRK

Specific function: Required for phage infection [H]

COG id: COG1511

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013525
- InterPro:   IPR017501
- InterPro:   IPR017500 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 49406; Mature: 49406

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNIQKIIKDDISAALKNPVVLIVLIALIILPSLYSVINIYACWDPYEDTDNINFIIVN
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
NDNPVTVNGTTYAYGDMVVDELKNNSNFNWVYKDEDEARESLKNGTDYAAIIIPEDFSKD
CCCEEEECCCEEEHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEEECCCHHHH
ILSVYSGNPKQAKIEYLDNDKTSPVAPKITSKAASNVVNEINNKIHEEYNTKNYISSNPV
HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
LLQQAQSSQTQNTTTANTTNTTVTNTNNSLAQSTSIQNVKNYFHEPTTLSNYSYYEADTY
HHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
GQQVSSFYTVLAAWVGGIILVALLSTKPTENKEKYKPIEVYFGKIGLFSIMSILQAIVTF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHEHHHHHHHHHHHHHHHHHH
IALSLLGIPMSNSVLMLGCMILIGLSFTAIIYSLVSVFGNVGKAIALIILVFQISGTNGI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
YPIEIMSTLFQTIMPYLPMTYAILILKDAIFGVVWPSFIRNVLCLIIFPLCAVALSIVVK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLDKSSKFFEEKLDESNLFELRK
HHHCHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MIKNIQKIIKDDISAALKNPVVLIVLIALIILPSLYSVINIYACWDPYEDTDNINFIIVN
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
NDNPVTVNGTTYAYGDMVVDELKNNSNFNWVYKDEDEARESLKNGTDYAAIIIPEDFSKD
CCCEEEECCCEEEHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEEECCCHHHH
ILSVYSGNPKQAKIEYLDNDKTSPVAPKITSKAASNVVNEINNKIHEEYNTKNYISSNPV
HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
LLQQAQSSQTQNTTTANTTNTTVTNTNNSLAQSTSIQNVKNYFHEPTTLSNYSYYEADTY
HHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
GQQVSSFYTVLAAWVGGIILVALLSTKPTENKEKYKPIEVYFGKIGLFSIMSILQAIVTF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHEHHHHHHHHHHHHHHHHHH
IALSLLGIPMSNSVLMLGCMILIGLSFTAIIYSLVSVFGNVGKAIALIILVFQISGTNGI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCE
YPIEIMSTLFQTIMPYLPMTYAILILKDAIFGVVWPSFIRNVLCLIIFPLCAVALSIVVK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKLDKSSKFFEEKLDESNLFELRK
HHHCHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8366036 [H]