| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489859
Identifier: 84489859
GI number: 84489859
Start: 1205883
End: 1206182
Strand: Direct
Name: 84489859
Synonym: Msp_1064
Alternate gene names: NA
Gene position: 1205883-1206182 (Clockwise)
Preceding gene: 84489858
Following gene: 84489862
Centisome position: 68.23
GC content: 30.67
Gene sequence:
>300_bases ATGGTAGATGGCAATATAAAAGATGAAATTCAAGATAAATTATCACTTATAGCTGATCCTCATATGGGTATTAGTATTGT TGAAATGGGACTTGTAAGAGATATTACTGTTGATGAAGCTAATAAAACAGCAAAAGTTGTTTTATCCCCAACAAATCCAG GATGTATGAGTATTGCTAATGTAGCAATGGCATCCAAATTAGAAATTGAAAAATTAGACAGTATTGATAAAGCTGAAATA GAAGTTATTGATCATATGATGGCAGACACCATCAATGAAATGGTTAATAAGGAAGAATAA
Upstream 100 bases:
>100_bases AATCTACTAAAGGTGTTGGTGTTAAAATTAGACACCAGATAAAATAAAAAAATATATAAAAAATAAATTTAAAAGTAATT AATAAATAGGAGATAAAAAA
Downstream 100 bases:
>100_bases TTTTTTAATTCATTATTTAGATAAAAAAATCATTTTGATGTATTTTTACATCAAATTTTTTTTGAAAAAAATAAAAACCA CAAAGTATATATATTAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MVDGNIKDEIQDKLSLIADPHMGISIVEMGLVRDITVDEANKTAKVVLSPTNPGCMSIANVAMASKLEIEKLDSIDKAEI EVIDHMMADTINEMVNKEE
Sequences:
>Translated_99_residues MVDGNIKDEIQDKLSLIADPHMGISIVEMGLVRDITVDEANKTAKVVLSPTNPGCMSIANVAMASKLEIEKLDSIDKAEI EVIDHMMADTINEMVNKEE >Mature_99_residues MVDGNIKDEIQDKLSLIADPHMGISIVEMGLVRDITVDEANKTAKVVLSPTNPGCMSIANVAMASKLEIEKLDSIDKAEI EVIDHMMADTINEMVNKEE
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 10826; Mature: 10826
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 8.1 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 8.1 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDGNIKDEIQDKLSLIADPHMGISIVEMGLVRDITVDEANKTAKVVLSPTNPGCMSIAN CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHH VAMASKLEIEKLDSIDKAEIEVIDHMMADTINEMVNKEE HHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVDGNIKDEIQDKLSLIADPHMGISIVEMGLVRDITVDEANKTAKVVLSPTNPGCMSIAN CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHH VAMASKLEIEKLDSIDKAEIEVIDHMMADTINEMVNKEE HHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]