| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is comB2
Identifier: 84489772
GI number: 84489772
Start: 1115940
End: 1116644
Strand: Direct
Name: comB2
Synonym: Msp_0973
Alternate gene names: 84489772
Gene position: 1115940-1116644 (Clockwise)
Preceding gene: 84489768
Following gene: 84489773
Centisome position: 63.14
GC content: 28.94
Gene sequence:
>705_bases ATGAAAGTAACTGTATCATTATTTAATTCTAAAACAAAAGATGTGGCAATAGTAATTGATTTATTAAGAGCAAGCACGAC AATAACAATAGCCTTAAATACATTCAATAAAGTAATACCAGTAAACACATCTAACGAAGCATTTGAACTAAAAAATAAAT ATAATGCACTACTTGCTGGAGAAGACAATCTTAAAACAATCGAAGGATTTGACATAACAAACTCACCAAAAGAAGTACAA AAACACGAAGGAGATGTACTTGTATTAAAAACAACAAATGGAACAAGAGTACTAGAAAATACAAAAAATAACAACAAAAA TGTAACAGTACTAATTGGTACAGGCATCAATGCAAATGCAGTAGCTAAAAAAGCACTAGAAATAGCTACTGAGGAGATAG AAATTGTAATGGCAGGAAGACATGAAAAATTCAATATAGAAGATGCAACAGGTGCAGGTGTAATAGTTAAAGAAATAATT AAATCTGCAAAAGATCAAAACATACCACTAGAATTAGATGAAACTGCACTTGCATCAACAATACTTGCTAAAGATGAAAA ACAAGTAAAAGAATTAATAGGAAATTCATGGGGCGCAACAAAACTTACTAAACTAGGATTAGAAGACGATGTTAAACTAT GTCAATTAATTAATGAAATTAATGAAGTACCAATATACAAAAATAATGAAATAACAAAACTATAA
Upstream 100 bases:
>100_bases GTATAAGAATTGTACTAGTATTATATTTTCATTTTAAAATTTAATATAACATTAATTATAAAAATTAATAATAAGAAAAA ACATAATTGGTGTAAAAAAC
Downstream 100 bases:
>100_bases TATAGGAGAATACAATGGAACTTATAGATATTGGATTAAATCTAATGCATAAATCATATGATAAAGATAGAATTGATGTT ATTAATGAAGCCAAAAAAGT
Product: ComB2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKVTVSLFNSKTKDVAIVIDLLRASTTITIALNTFNKVIPVNTSNEAFELKNKYNALLAGEDNLKTIEGFDITNSPKEVQ KHEGDVLVLKTTNGTRVLENTKNNNKNVTVLIGTGINANAVAKKALEIATEEIEIVMAGRHEKFNIEDATGAGVIVKEII KSAKDQNIPLELDETALASTILAKDEKQVKELIGNSWGATKLTKLGLEDDVKLCQLINEINEVPIYKNNEITKL
Sequences:
>Translated_234_residues MKVTVSLFNSKTKDVAIVIDLLRASTTITIALNTFNKVIPVNTSNEAFELKNKYNALLAGEDNLKTIEGFDITNSPKEVQ KHEGDVLVLKTTNGTRVLENTKNNNKNVTVLIGTGINANAVAKKALEIATEEIEIVMAGRHEKFNIEDATGAGVIVKEII KSAKDQNIPLELDETALASTILAKDEKQVKELIGNSWGATKLTKLGLEDDVKLCQLINEINEVPIYKNNEITKL >Mature_234_residues MKVTVSLFNSKTKDVAIVIDLLRASTTITIALNTFNKVIPVNTSNEAFELKNKYNALLAGEDNLKTIEGFDITNSPKEVQ KHEGDVLVLKTTNGTRVLENTKNNNKNVTVLIGTGINANAVAKKALEIATEEIEIVMAGRHEKFNIEDATGAGVIVKEII KSAKDQNIPLELDETALASTILAKDEKQVKELIGNSWGATKLTKLGLEDDVKLCQLINEINEVPIYKNNEITKL
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 25612; Mature: 25612
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTVSLFNSKTKDVAIVIDLLRASTTITIALNTFNKVIPVNTSNEAFELKNKYNALLAG CEEEEEECCCCCCCCEEEEEEHHCCEEEEEEEECCCEEEECCCCCCCEEHHCCCCEEEEC EDNLKTIEGFDITNSPKEVQKHEGDVLVLKTTNGTRVLENTKNNNKNVTVLIGTGINANA CCCCEEEECCCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCCCEEEEEEECCCCHHH VAKKALEIATEEIEIVMAGRHEKFNIEDATGAGVIVKEIIKSAKDQNIPLELDETALAST HHHHHHHHHHHEEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHH ILAKDEKQVKELIGNSWGATKLTKLGLEDDVKLCQLINEINEVPIYKNNEITKL HHHCCHHHHHHHHCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCCEECCCCCCC >Mature Secondary Structure MKVTVSLFNSKTKDVAIVIDLLRASTTITIALNTFNKVIPVNTSNEAFELKNKYNALLAG CEEEEEECCCCCCCCEEEEEEHHCCEEEEEEEECCCEEEECCCCCCCEEHHCCCCEEEEC EDNLKTIEGFDITNSPKEVQKHEGDVLVLKTTNGTRVLENTKNNNKNVTVLIGTGINANA CCCCEEEECCCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCCCEEEEEEECCCCHHH VAKKALEIATEEIEIVMAGRHEKFNIEDATGAGVIVKEIIKSAKDQNIPLELDETALAST HHHHHHHHHHHEEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHH ILAKDEKQVKELIGNSWGATKLTKLGLEDDVKLCQLINEINEVPIYKNNEITKL HHHCCHHHHHHHHCCCCCCCHHEECCCCCHHHHHHHHHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]