| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489768
Identifier: 84489768
GI number: 84489768
Start: 1112448
End: 1112798
Strand: Direct
Name: 84489768
Synonym: Msp_0969
Alternate gene names: NA
Gene position: 1112448-1112798 (Clockwise)
Preceding gene: 84489764
Following gene: 84489772
Centisome position: 62.94
GC content: 22.79
Gene sequence:
>351_bases ATGAATAGTAAATCATTAACATTAAATAATTTAGGTATAATTGAGGAATTAAATTTTATTAGAAGTTATCATAAATACTT ACTAGAATATTGTATAGAAAATGAAATATCTTATGATGGTAAGATTGCTGTAGCAATACTTAAATTAAATGAAGATATAG AAAGAATAGTATCTAATCCTGATGAAATTATAAGTCCAAGTGATATGAAATTACTTATTAAAATAGCAGAAGGTAGAGTA TTTCTAGAAACTACAGAATTATCTCCAATTTACAATACAAAAAATACTCATGATATTCTTAGAATTCCACGTTATAAAAT GTATCATATACTTGAAAGTCATGGATATTAA
Upstream 100 bases:
>100_bases TTTAAATATTGTCTTTTAAAATTTTTTTTACTAAACATGATATAACTTAATAATAGAAAATAGAAATAATAATATAATAG AATATAGGTTGAATAATTAT
Downstream 100 bases:
>100_bases CTATCCTATTATCTCCTTTAATTTTTCAGAATTTATGGATGTTGATATTCTATTTTGCATCCAATGATTACTACATCCTA CATAATTAAGAATAACACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNSKSLTLNNLGIIEELNFIRSYHKYLLEYCIENEISYDGKIAVAILKLNEDIERIVSNPDEIISPSDMKLLIKIAEGRV FLETTELSPIYNTKNTHDILRIPRYKMYHILESHGY
Sequences:
>Translated_116_residues MNSKSLTLNNLGIIEELNFIRSYHKYLLEYCIENEISYDGKIAVAILKLNEDIERIVSNPDEIISPSDMKLLIKIAEGRV FLETTELSPIYNTKNTHDILRIPRYKMYHILESHGY >Mature_116_residues MNSKSLTLNNLGIIEELNFIRSYHKYLLEYCIENEISYDGKIAVAILKLNEDIERIVSNPDEIISPSDMKLLIKIAEGRV FLETTELSPIYNTKNTHDILRIPRYKMYHILESHGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13546; Mature: 13546
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKSLTLNNLGIIEELNFIRSYHKYLLEYCIENEISYDGKIAVAILKLNEDIERIVSNP CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCC DEIISPSDMKLLIKIAEGRVFLETTELSPIYNTKNTHDILRIPRYKMYHILESHGY CCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MNSKSLTLNNLGIIEELNFIRSYHKYLLEYCIENEISYDGKIAVAILKLNEDIERIVSNP CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCC DEIISPSDMKLLIKIAEGRVFLETTELSPIYNTKNTHDILRIPRYKMYHILESHGY CCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA