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The map label for this gene is yfdE [H]

Identifier: 83721611

GI number: 83721611

Start: 2060608

End: 2062047

Strand: Direct

Name: yfdE [H]

Synonym: BTH_I1834

Alternate gene names: 83721611

Gene position: 2060608-2062047 (Clockwise)

Preceding gene: 83719195

Following gene: 83719345

Centisome position: 54.1

GC content: 73.06

Gene sequence:

>1440_bases
ATGAGCGACGATGCCTCGAAGCAATTCCCGTCTTCGGGCGGCTTGGAGATCGAGCGCGACGCAGCGCGGGCGATCGATTC
GGCAGGTGCGGCCGGCGTCGCTGGCGCGGCAGGGCGCGCCGCGAATCCGTCGCAGCCGGCGAGCGCGCTTTGCGCTCCGC
CTGCGCAGCGCGAACCGCTGGAGACGGCGGCCGCAAACGCCGCACGCCGACCGGGTTCGGCCTCCCCGCGCGACGCGGCG
GCGACCGAGCACGCCCGCCGCGGCGCACTCGCGGGCCTGAAGATCGTCGACCTGAGCCGCGTCCTCGGCGGCCCGTACTG
CACGCAGGCGCTCGCGGACCACGGCGCGCGCGTGATCAAGATCGAGCCGCCGGCGGGCGACGAGACGCGCGGCTGGGGCC
CGCCGTTCTTCGACGACGACGCGTGGTACTTCATCGGCGTGAACCGCAACAAGGAAGGCATCGCGCTCGACCTGTCGCGC
GACGAAGGCCGCGCGATCCTCTGGCGTCTGCTCGAAGACGCGGACGTGCTCGTCGAGAATTTCAAGCCCGGCACGCTCGC
GCGTTGGGGGATGGACTACGAGCGGGACTTGCGGCCGCGCTTTCCCCGTCTCGTCCATTGCGCGATCACGGGCTTCGGCG
CCGACGGCCCGCTCGGCGGGCTGCCCGGCTACGACGCGGTGATCCAGGCGATGGCGGGCCTCATGAGCGTGAACGGCGAC
GCCTGCGGCGGCGCGACCCGCATCGGCCTGCCGATCGTCGACATGGTGACGGGCCTGAACGCGCTCGCCGGCATCCTGCT
CGCGCTCGCCGAGCGCGAGAAAAGCGGCGTCGGCCAGTCGGTCGACATCGCGCTGTACGACTGCGGCGTGTCGCTGCTGC
ATCCGCATTTGCCGAACTGGTTCGGCTCGGGGCGCACGCCCGCGCGCAGCGGCAACGCGCATCCGAACATCGCGCCGTAC
GACAGCTACCGCACCGCGACCGGGCCGATCTTTCTCGCGGTCGGCAACGACCGGCAGTTCGCCCGGCTCTGCGCGCATCT
GGGCGTGCCCGAGCTCGCGGGCGACCCGCGTTTCGTCGACAACCGCAGCCGTTGCGCGCACCGCGCCGAGCTGAAGGCGA
GCCTCGAGGCGCGGCTCGCCGATCGCGACTGCGAGACGCTCGCGCGCGAGCTGATGGCCGAGGGCGTGCCGTGCGGGCCG
GTGCGCACGGTCGACGCGGTCGCGCGCGATCCGCACACGCTGCATCGCGGGCTCGTCGTCGAGATGGGGCGATACCGGGG
CGCCGCATCGCCGATCAAGCTGTCGCGCACGAGCGCGACGTACCGCACCGCGCCGCCCATGCTCGGGCGCGATACGCGCG
CGGTGCTCGACGCGCTCGGCATCGACGCGGCGACGCAGGCGCGCCTCGCCGAAGCGGGCGTGCTGAAGGAGGCGAAGTAG

Upstream 100 bases:

>100_bases
CCGATGCGAACTCTGGCGCGCTGGCGGCGTTGCTGCACGATCGGCCCGTCGCGCTCGACGACGCGTTGCGGTTGCTCGAC
GGTCCGTCGGGAGAGGCGGC

Downstream 100 bases:

>100_bases
ATGGCGACGTGAGCGAATGGACGCGGCCGCCGACGCTTGGCGGCGGCCGCGGCTCGATGGGCGCCGCCGGGTGCGCGCGC
GGCCGAACGTCCGCAGACGA

Product: CAIB/BAIF family CoA transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSDDASKQFPSSGGLEIERDAARAIDSAGAAGVAGAAGRAANPSQPASALCAPPAQREPLETAAANAARRPGSASPRDAA
ATEHARRGALAGLKIVDLSRVLGGPYCTQALADHGARVIKIEPPAGDETRGWGPPFFDDDAWYFIGVNRNKEGIALDLSR
DEGRAILWRLLEDADVLVENFKPGTLARWGMDYERDLRPRFPRLVHCAITGFGADGPLGGLPGYDAVIQAMAGLMSVNGD
ACGGATRIGLPIVDMVTGLNALAGILLALAEREKSGVGQSVDIALYDCGVSLLHPHLPNWFGSGRTPARSGNAHPNIAPY
DSYRTATGPIFLAVGNDRQFARLCAHLGVPELAGDPRFVDNRSRCAHRAELKASLEARLADRDCETLARELMAEGVPCGP
VRTVDAVARDPHTLHRGLVVEMGRYRGAASPIKLSRTSATYRTAPPMLGRDTRAVLDALGIDAATQARLAEAGVLKEAK

Sequences:

>Translated_479_residues
MSDDASKQFPSSGGLEIERDAARAIDSAGAAGVAGAAGRAANPSQPASALCAPPAQREPLETAAANAARRPGSASPRDAA
ATEHARRGALAGLKIVDLSRVLGGPYCTQALADHGARVIKIEPPAGDETRGWGPPFFDDDAWYFIGVNRNKEGIALDLSR
DEGRAILWRLLEDADVLVENFKPGTLARWGMDYERDLRPRFPRLVHCAITGFGADGPLGGLPGYDAVIQAMAGLMSVNGD
ACGGATRIGLPIVDMVTGLNALAGILLALAEREKSGVGQSVDIALYDCGVSLLHPHLPNWFGSGRTPARSGNAHPNIAPY
DSYRTATGPIFLAVGNDRQFARLCAHLGVPELAGDPRFVDNRSRCAHRAELKASLEARLADRDCETLARELMAEGVPCGP
VRTVDAVARDPHTLHRGLVVEMGRYRGAASPIKLSRTSATYRTAPPMLGRDTRAVLDALGIDAATQARLAEAGVLKEAK
>Mature_478_residues
SDDASKQFPSSGGLEIERDAARAIDSAGAAGVAGAAGRAANPSQPASALCAPPAQREPLETAAANAARRPGSASPRDAAA
TEHARRGALAGLKIVDLSRVLGGPYCTQALADHGARVIKIEPPAGDETRGWGPPFFDDDAWYFIGVNRNKEGIALDLSRD
EGRAILWRLLEDADVLVENFKPGTLARWGMDYERDLRPRFPRLVHCAITGFGADGPLGGLPGYDAVIQAMAGLMSVNGDA
CGGATRIGLPIVDMVTGLNALAGILLALAEREKSGVGQSVDIALYDCGVSLLHPHLPNWFGSGRTPARSGNAHPNIAPYD
SYRTATGPIFLAVGNDRQFARLCAHLGVPELAGDPRFVDNRSRCAHRAELKASLEARLADRDCETLARELMAEGVPCGPV
RTVDAVARDPHTLHRGLVVEMGRYRGAASPIKLSRTSATYRTAPPMLGRDTRAVLDALGIDAATQARLAEAGVLKEAK

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=395, Percent_Identity=36.7088607594937, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI300863124, Length=421, Percent_Identity=34.4418052256532, Blast_Score=248, Evalue=6e-66,
Organism=Homo sapiens, GI300863126, Length=395, Percent_Identity=32.6582278481013, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=30.8788598574822, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI266456254, Length=402, Percent_Identity=27.1144278606965, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI42794625, Length=402, Percent_Identity=27.1144278606965, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI266458393, Length=270, Percent_Identity=32.2222222222222, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI266458397, Length=263, Percent_Identity=31.9391634980989, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI266458395, Length=147, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI42822893, Length=147, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=5e-14,
Organism=Escherichia coli, GI87082093, Length=355, Percent_Identity=39.1549295774648, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1788717, Length=399, Percent_Identity=32.0802005012531, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI1786222, Length=405, Percent_Identity=26.6666666666667, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI115535051, Length=255, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24648431, Length=399, Percent_Identity=39.8496240601504, Blast_Score=278, Evalue=5e-75,
Organism=Drosophila melanogaster, GI24585488, Length=271, Percent_Identity=27.6752767527675, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 50489; Mature: 50357

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDASKQFPSSGGLEIERDAARAIDSAGAAGVAGAAGRAANPSQPASALCAPPAQREPL
CCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCH
ETAAANAARRPGSASPRDAAATEHARRGALAGLKIVDLSRVLGGPYCTQALADHGARVIK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEEHHHHHCCHHHHHHHHHCCCEEEE
IEPPAGDETRGWGPPFFDDDAWYFIGVNRNKEGIALDLSRDEGRAILWRLLEDADVLVEN
ECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
FKPGTLARWGMDYERDLRPRFPRLVHCAITGFGADGPLGGLPGYDAVIQAMAGLMSVNGD
CCCCCHHHCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
ACGGATRIGLPIVDMVTGLNALAGILLALAEREKSGVGQSVDIALYDCGVSLLHPHLPNW
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCCC
FGSGRTPARSGNAHPNIAPYDSYRTATGPIFLAVGNDRQFARLCAHLGVPELAGDPRFVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
NRSRCAHRAELKASLEARLADRDCETLARELMAEGVPCGPVRTVDAVARDPHTLHRGLVV
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHH
EMGRYRGAASPIKLSRTSATYRTAPPMLGRDTRAVLDALGIDAATQARLAEAGVLKEAK
HHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDDASKQFPSSGGLEIERDAARAIDSAGAAGVAGAAGRAANPSQPASALCAPPAQREPL
CCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCH
ETAAANAARRPGSASPRDAAATEHARRGALAGLKIVDLSRVLGGPYCTQALADHGARVIK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEEHHHHHCCHHHHHHHHHCCCEEEE
IEPPAGDETRGWGPPFFDDDAWYFIGVNRNKEGIALDLSRDEGRAILWRLLEDADVLVEN
ECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
FKPGTLARWGMDYERDLRPRFPRLVHCAITGFGADGPLGGLPGYDAVIQAMAGLMSVNGD
CCCCCHHHCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
ACGGATRIGLPIVDMVTGLNALAGILLALAEREKSGVGQSVDIALYDCGVSLLHPHLPNW
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCCC
FGSGRTPARSGNAHPNIAPYDSYRTATGPIFLAVGNDRQFARLCAHLGVPELAGDPRFVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
NRSRCAHRAELKASLEARLADRDCETLARELMAEGVPCGPVRTVDAVARDPHTLHRGLVV
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHH
EMGRYRGAASPIKLSRTSATYRTAPPMLGRDTRAVLDALGIDAATQARLAEAGVLKEAK
HHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]