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The map label for this gene is aidB [H]

Identifier: 83719195

GI number: 83719195

Start: 2058830

End: 2060611

Strand: Direct

Name: aidB [H]

Synonym: BTH_I1833

Alternate gene names: 83719195

Gene position: 2058830-2060611 (Clockwise)

Preceding gene: 83718550

Following gene: 83721611

Centisome position: 54.05

GC content: 69.81

Gene sequence:

>1782_bases
ATGAACATGATGAAAGAAATCGTCGAGGCGAGCACGCCCGCGGCGGGCGCCGCCCACATCCCCGATTCGCGGGGCATCAA
CTTCTTCACGAGCGACCCCGATTGTGCGGCGCTGTTGCGGCTTCATCTCGGCGAAGCGCGCTTTCGCACCCTCGAGCCGG
AGTTGCGCGCGCTCGGGCTGCGCGCGTCGGACGAGCTCGATCGCCTCGCGTCGCGCGCCGACAAGAACCCGCCCGTGCTG
CAGCCGCGCACGCGTCGCGGCGAGTCGCTCGAGACGATCGACAAGCATCCGGACTATGTCGCACTCGAGCGCGTCGCGTA
TTCGGAACTTGGGCTTGCCGCGATGAGCCATCGTGACGATGCGCCGCCGCCGCTCGTCAAGTACGCGTTGACGTTCCTGT
TCGTTCAGGCGGAGTTCGGCCTCTGCTGCCCCGTCAGCATGACCGATTCGCTCACGCGCACGCTGCGCCGTTACGGTTCG
CGCGAGCTTGTCGAGCGTTTCCTGCCGCGGCTCGCGTCGCGCGATTTCGGCGTGCTGCACCAGGGCGCGATGTTCATGAC
CGAGCAGGCCGCCGGTTCCGACGTCGGCCGGATCGCGACGCGCGCGGTGCGCGAGACGTCCGCCAATGGCGCGGCGACAT
GGCGTCTGTTCGGCGACAAATGGTTCTGCTCGAACGCGGACGCCGATCTCGCGATGGTGCTCGCGCGGCCCGAAGGCGCG
CCCGACGGCGTCAACGGGCTCGCGTTGTTCCTGCTGCCGAAGACGCTCGCCGACGGCTCGCGCAATCGCTATCGGATCGT
GCGCCTGAAAGACAAGCTCGGCAGCCGCTCGATGGCGAGCGGCGAGATCGCGCTGGAGGGCGCCGAAGCGTATCTGATCG
GCGAGATCGGGCGCGGCTTCCACCAGATGGCCGACATGATCAACATGTCGCGTCTGTCGAACGGCGTGCGTGCGGCGGGG
TTGATGCGTCGCGCGACGGCGGAGGCGCTGCATGTCGCGCGCCATCGCGAAGCGTTCGGCCGCAAGCTGATCGACATGCC
GCTGATGCAGCGGCAGCTCGTCAAGATGCTCGTGCCGACCGAGCAGGCGCGCTCGCTCTTCATGCAGATCGCGATGCTGC
TCGCGCAAGCCGACGCGGGCGACGCGCAGGCAGCCGGCTGCGTGCGAATCCTGACGCCGCTCATCAAGTTCCGCGCGTGC
CGCGACGCGCGCCGCGTCGCCGGCGATGCGATGGAGGTGCGCGGCGGCACCGGCTACATCGAGGAGTGGAGCGATGCGCG
CGTGCTGCGCGACGCGCATCTCGGCTCGATCTGGGAGGGCACGAGCAACATCGTCGCGCTCGACGTCGCGCGGGCGGTCA
AGCGGGAAGGCGCGCTTGCGCCGCTGCGTGCGTTCCTGCTCGACACGCTCGACGCGGCGCGGCTGCCCGGCGCGAGCGCG
ACGCGCCTGCGCCGCGCGCTCGATCGCGCGAGCGACGCGATCGCACACGTCGCGCAGACGGGCGACGATGCGTTCGTGCG
GCAGTCGGCGAGCGCGCTTTATCACGCGACGACCGCGATCCTCCTCGCGAGCGAAGGGATGCGGCTCGCGCCCGATCATC
GACGGCTCGCGCTCGCGCATCTCGTGCTGCGGCACAAGCTGTCGCCCGTCGATCCGCTCGCAATGCCGCGCGCCGATGCC
GATGCGAACTCTGGCGCGCTGGCGGCGTTGCTGCACGATCGGCCCGTCGCGCTCGACGACGCGTTGCGGTTGCTCGACGG
TCCGTCGGGAGAGGCGGCATGA

Upstream 100 bases:

>100_bases
GTTCGGGGCGATCGATAAATGCAGCTTATCGTACTGGATAAATCCTGTATTGGACGATTATCGGTCGCGGTTCTACGCTC
GTCGGACCAGGAGACAAGCG

Downstream 100 bases:

>100_bases
GCGACGATGCCTCGAAGCAATTCCCGTCTTCGGGCGGCTTGGAGATCGAGCGCGACGCAGCGCGGGCGATCGATTCGGCA
GGTGCGGCCGGCGTCGCTGG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MNMMKEIVEASTPAAGAAHIPDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGLRASDELDRLASRADKNPPVL
QPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRYGS
RELVERFLPRLASRDFGVLHQGAMFMTEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGA
PDGVNGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADMINMSRLSNGVRAAG
LMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRAC
RDARRVAGDAMEVRGGTGYIEEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDTLDAARLPGASA
TRLRRALDRASDAIAHVAQTGDDAFVRQSASALYHATTAILLASEGMRLAPDHRRLALAHLVLRHKLSPVDPLAMPRADA
DANSGALAALLHDRPVALDDALRLLDGPSGEAA

Sequences:

>Translated_593_residues
MNMMKEIVEASTPAAGAAHIPDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGLRASDELDRLASRADKNPPVL
QPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRYGS
RELVERFLPRLASRDFGVLHQGAMFMTEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGA
PDGVNGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADMINMSRLSNGVRAAG
LMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRAC
RDARRVAGDAMEVRGGTGYIEEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDTLDAARLPGASA
TRLRRALDRASDAIAHVAQTGDDAFVRQSASALYHATTAILLASEGMRLAPDHRRLALAHLVLRHKLSPVDPLAMPRADA
DANSGALAALLHDRPVALDDALRLLDGPSGEAA
>Mature_593_residues
MNMMKEIVEASTPAAGAAHIPDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGLRASDELDRLASRADKNPPVL
QPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDDAPPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRYGS
RELVERFLPRLASRDFGVLHQGAMFMTEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGA
PDGVNGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGFHQMADMINMSRLSNGVRAAG
LMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPTEQARSLFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRAC
RDARRVAGDAMEVRGGTGYIEEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDTLDAARLPGASA
TRLRRALDRASDAIAHVAQTGDDAFVRQSASALYHATTAILLASEGMRLAPDHRRLALAHLVLRHKLSPVDPLAMPRADA
DANSGALAALLHDRPVALDDALRLLDGPSGEAA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=384, Percent_Identity=25.78125, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4501859, Length=327, Percent_Identity=26.605504587156, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958412, Length=312, Percent_Identity=27.5641025641026, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI226958414, Length=312, Percent_Identity=27.5641025641026, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557233, Length=371, Percent_Identity=27.7628032345013, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4557235, Length=340, Percent_Identity=26.7647058823529, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI76496475, Length=340, Percent_Identity=26.7647058823529, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4501857, Length=304, Percent_Identity=26.6447368421053, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI4557231, Length=276, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI187960098, Length=276, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4503943, Length=307, Percent_Identity=28.6644951140065, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87082384, Length=416, Percent_Identity=34.6153846153846, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI87081958, Length=311, Percent_Identity=27.3311897106109, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786223, Length=308, Percent_Identity=24.6753246753247, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI86563383, Length=439, Percent_Identity=33.2574031890661, Blast_Score=213, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI86563381, Length=439, Percent_Identity=33.2574031890661, Blast_Score=213, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17538396, Length=304, Percent_Identity=29.9342105263158, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=317, Percent_Identity=25.5520504731861, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=302, Percent_Identity=25.1655629139073, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=306, Percent_Identity=29.7385620915033, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=316, Percent_Identity=28.7974683544304, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=351, Percent_Identity=24.5014245014245, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=293, Percent_Identity=25.938566552901, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17534899, Length=303, Percent_Identity=25.0825082508251, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=308, Percent_Identity=26.2987012987013, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=301, Percent_Identity=26.2458471760797, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=296, Percent_Identity=26.0135135135135, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71990804, Length=216, Percent_Identity=23.1481481481481, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355753, Length=308, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=321, Percent_Identity=24.9221183800623, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281363737, Length=301, Percent_Identity=26.9102990033223, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21356377, Length=281, Percent_Identity=26.3345195729537, Blast_Score=81, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24660351, Length=300, Percent_Identity=27.6666666666667, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24646207, Length=306, Percent_Identity=24.5098039215686, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 64419; Mature: 64419

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMMKEIVEASTPAAGAAHIPDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGL
CCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCHHHHHHCCHHHHHHCC
RASDELDRLASRADKNPPVLQPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDD
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
APPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLH
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
QGAMFMTEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGA
CCHHHEEHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCEEEEEECCCCC
PDGVNGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGF
CCCCCCEEEEEEHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECCCEEEEHHHHHHH
HQMADMINMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EQARSLFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCH
EEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDTLDAARLPGASA
HCCCCHHHHHHHHCCCHHCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
TRLRRALDRASDAIAHVAQTGDDAFVRQSASALYHATTAILLASEGMRLAPDHRRLALAH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LVLRHKLSPVDPLAMPRADADANSGALAALLHDRPVALDDALRLLDGPSGEAA
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNMMKEIVEASTPAAGAAHIPDSRGINFFTSDPDCAALLRLHLGEARFRTLEPELRALGL
CCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCHHHHHHCCHHHHHHCC
RASDELDRLASRADKNPPVLQPRTRRGESLETIDKHPDYVALERVAYSELGLAAMSHRDD
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
APPPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRRYGSRELVERFLPRLASRDFGVLH
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
QGAMFMTEQAAGSDVGRIATRAVRETSANGAATWRLFGDKWFCSNADADLAMVLARPEGA
CCHHHEEHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCEEEEEECCCCC
PDGVNGLALFLLPKTLADGSRNRYRIVRLKDKLGSRSMASGEIALEGAEAYLIGEIGRGF
CCCCCCEEEEEEHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECCCEEEEHHHHHHH
HQMADMINMSRLSNGVRAAGLMRRATAEALHVARHREAFGRKLIDMPLMQRQLVKMLVPT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EQARSLFMQIAMLLAQADAGDAQAAGCVRILTPLIKFRACRDARRVAGDAMEVRGGTGYI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCH
EEWSDARVLRDAHLGSIWEGTSNIVALDVARAVKREGALAPLRAFLLDTLDAARLPGASA
HCCCCHHHHHHHHCCCHHCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
TRLRRALDRASDAIAHVAQTGDDAFVRQSASALYHATTAILLASEGMRLAPDHRRLALAH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LVLRHKLSPVDPLAMPRADADANSGALAALLHDRPVALDDALRLLDGPSGEAA
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]