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The map label for this gene is ompW [H]

Identifier: 83720575

GI number: 83720575

Start: 3555160

End: 3555990

Strand: Direct

Name: ompW [H]

Synonym: BTH_I3117

Alternate gene names: 83720575

Gene position: 3555160-3555990 (Clockwise)

Preceding gene: 83721105

Following gene: 83719201

Centisome position: 93.33

GC content: 66.79

Gene sequence:

>831_bases
ATGAAAAAAGCACTCTGCACGGCGCTCGGCGTCGCGGCGCTGACGCCGCTCGCCGCGCACGCGCAAAGCGCGGGCAGCAA
CGTCGTCACGCTCGGCTGGTTCCACGTGATGCCGCAGCAAAGCAGCACGCCGCTCACGACGAACGTCGCGCCGACGCCGA
TCAACACGCCGCTGCGGCTGCCGTCGTCGTTCACGTCGGCGGGCACGGGCCTGTCGACGAGCGGCGCGGACACGGTCGGC
CTGACCGTCAGCCACTTCCTGACCGACCACATCGCCGTCACGTCGGTGGCGGGCGTGCCCCCCATCTTCAAGGTATCGGG
TCACGGCACGATCACGCCGCCCGGCCCGGCGGGCGCGCTCGGCACGCAGAACATCGGGCTCGGCCCGGTCAATCCGATCG
TGAAGAGCGTGCGGCAGTGGAGCCCTGCCGTCGTGTTCCAGTACTACTTCGCGCAGGCGAACGCGAAGTTCCGGCCGTTC
GTCGGCATCGGCGTGTCGTACAACTGGTTCAGCGATCTGCAACTGAACACGAACTTCATCAAGCAGACGCAGAACAACCT
CGGCGCGATCCTCGCCGCGGGCGCCGGCAAGCCCGGGCTCACGCAGGTGTCGGCGAAGGCGTCGTCGTCGTGGCAGCCGG
TGTTCAACGCGGGGCTCTCGTACAACATCACCGATCACTGGGGGCTCGTCGCGTCGGTCACGTACATCCCGCTGAAGACG
ACATCGACGGTGACGATCAAGGCGGCCGACGGCACGACGCTTGCGGAGTCGAAGTCGGACCTGAAGGCCGATCCGATCAT
CAGTTACGTCGCGGTGTCGTACAAGTTCTGA

Upstream 100 bases:

>100_bases
TTCACGGGCGGGGTGTTCGGCTTCCTCGACATGTCCAACTCGTCGTCGCCGTACTTCACGGTCGGCGCATTCGTGCAGTA
ACCGGCGCTCGGGAGGCCTT

Downstream 100 bases:

>100_bases
CCTGGGAGGCGCGCCCGCGCGGACGCGCCCCCGGGTTCGCGCGGGCAAAAAAAAGGTTCATCGCAGAAAACCGTGGAGCC
TTGGAGAACGATTGCGTAAC

Product: OmpW family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKKALCTALGVAALTPLAAHAQSAGSNVVTLGWFHVMPQQSSTPLTTNVAPTPINTPLRLPSSFTSAGTGLSTSGADTVG
LTVSHFLTDHIAVTSVAGVPPIFKVSGHGTITPPGPAGALGTQNIGLGPVNPIVKSVRQWSPAVVFQYYFAQANAKFRPF
VGIGVSYNWFSDLQLNTNFIKQTQNNLGAILAAGAGKPGLTQVSAKASSSWQPVFNAGLSYNITDHWGLVASVTYIPLKT
TSTVTIKAADGTTLAESKSDLKADPIISYVAVSYKF

Sequences:

>Translated_276_residues
MKKALCTALGVAALTPLAAHAQSAGSNVVTLGWFHVMPQQSSTPLTTNVAPTPINTPLRLPSSFTSAGTGLSTSGADTVG
LTVSHFLTDHIAVTSVAGVPPIFKVSGHGTITPPGPAGALGTQNIGLGPVNPIVKSVRQWSPAVVFQYYFAQANAKFRPF
VGIGVSYNWFSDLQLNTNFIKQTQNNLGAILAAGAGKPGLTQVSAKASSSWQPVFNAGLSYNITDHWGLVASVTYIPLKT
TSTVTIKAADGTTLAESKSDLKADPIISYVAVSYKF
>Mature_276_residues
MKKALCTALGVAALTPLAAHAQSAGSNVVTLGWFHVMPQQSSTPLTTNVAPTPINTPLRLPSSFTSAGTGLSTSGADTVG
LTVSHFLTDHIAVTSVAGVPPIFKVSGHGTITPPGPAGALGTQNIGLGPVNPIVKSVRQWSPAVVFQYYFAQANAKFRPF
VGIGVSYNWFSDLQLNTNFIKQTQNNLGAILAAGAGKPGLTQVSAKASSSWQPVFNAGLSYNITDHWGLVASVTYIPLKT
TSTVTIKAADGTTLAESKSDLKADPIISYVAVSYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=276, Percent_Identity=25, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 28671; Mature: 28671

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALCTALGVAALTPLAAHAQSAGSNVVTLGWFHVMPQQSSTPLTTNVAPTPINTPLRL
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCC
PSSFTSAGTGLSTSGADTVGLTVSHFLTDHIAVTSVAGVPPIFKVSGHGTITPPGPAGAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCC
GTQNIGLGPVNPIVKSVRQWSPAVVFQYYFAQANAKFRPFVGIGVSYNWFSDLQLNTNFI
CCCCCCCCCHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCEEEECCEECCCCCEEECHHHH
KQTQNNLGAILAAGAGKPGLTQVSAKASSSWQPVFNAGLSYNITDHWGLVASVTYIPLKT
HHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHCCCEEECCCCCCEEEEEEEEEEEC
TSTVTIKAADGTTLAESKSDLKADPIISYVAVSYKF
CCEEEEEECCCCEECCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKALCTALGVAALTPLAAHAQSAGSNVVTLGWFHVMPQQSSTPLTTNVAPTPINTPLRL
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCC
PSSFTSAGTGLSTSGADTVGLTVSHFLTDHIAVTSVAGVPPIFKVSGHGTITPPGPAGAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCC
GTQNIGLGPVNPIVKSVRQWSPAVVFQYYFAQANAKFRPFVGIGVSYNWFSDLQLNTNFI
CCCCCCCCCHHHHHHHHHHCCCHHEEEEHHHHCCCCCCCEEEECCEECCCCCEEECHHHH
KQTQNNLGAILAAGAGKPGLTQVSAKASSSWQPVFNAGLSYNITDHWGLVASVTYIPLKT
HHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHCCCEEECCCCCCEEEEEEEEEEEC
TSTVTIKAADGTTLAESKSDLKADPIISYVAVSYKF
CCEEEEEECCCCEECCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]