Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 83719201

GI number: 83719201

Start: 3556186

End: 3557346

Strand: Direct

Name: tnpA [H]

Synonym: BTH_I3118

Alternate gene names: 83719201

Gene position: 3556186-3557346 (Clockwise)

Preceding gene: 83720575

Following gene: 83721345

Centisome position: 93.36

GC content: 62.62

Gene sequence:

>1161_bases
GTGGAGTGGCCGCAGGGCGATAGCCGCACGCTGTCGCTCTACCTGAAGCCGGTCAGTCGGATCATGTACTGCGAGCAATG
CGGTGCGCGTTGCCAGCAGATTCATGAAACGACCGTACGGCGGGTACGTGATCTGCCGTTGTTCGAGTACCGGGTGGTGC
TGCACGTGCCTCGACGCCGAGTCTGGTGCGAACGCTGCGGCGCAGCGCGGCTGGAGAAGCTGGACTGGCTGGGCCGCTAC
CAGCGGGTGACGGAGCGGTTTGCCCAGGCCTGCGAGAAGTTGCTGCAGGCCGCCAGCGTACAGGCCGTGGCGGCCTTCTA
CGATCTGGGCTGGCACACGGTCAAATCGATCGACAAGATGCGCTTGCGCGCGCGCGTGGCCGAACCGGACTGGTCGACGA
TCCGTTATCTGGCGATGGACGAGTTCGCGCTCCATAAAGGCCATCGCTACGCCACGGTGGTGGTTGATCCGATCGGCCGG
CAGGTCCTCTGGGTTGGGCCCGGACGGTCACGCGAGACGGCGCGCGCCTTCTTCGAACAACTCCCCGAAGGCGTGGCCGA
GCGCATCGAAGCGGTCGCAATCGACATGACCACGGCCTATGAGCTGGAGATCAAGGAACAGTGCCCGCAGGCGGAAATCG
TCTTTGACCTGTACCACGTCGTGGCCAAGTACGGTCGCGAGGTGATCGATCGGGTACGGGTGGATCAGGCCAACCAACTG
CGACATGACAAGCCGGCCCGCAAGGTTCTGAAGTCCAGTCGCTGGTTGCTGCTGCGCAACCGTCATAACCTGAAGCCAGA
ACAGGCCGTGCATCTGAAGGAACTGCTGGCGGCCAATCAGTCGCTGTTATGCGTCTATGTGCTGCGCGACGAGCTCAAAC
GGCTCTGGTTCTACCGCAAGCCGGCCTGCGCGGAAAAGGCTTGGGGGCAATGGTTCGAACAGGCTCAGCAAAGCGGGATC
GCCGTCTTGCAAAAGTTCGCCCAGCGCTTGCAGGGTTACTGGCACGGAATCGTGGCCCGCTGCCGCCATCCGCTCAATAC
CAGCGTCGTCGAAGGCATCAACAACACGATCAAGGTCATCAAGCGCCGAGCTTACGGGTACCGCGACGAGCAATACTTCT
TCCTCAAGATCCGCGCCGCGTTCCCCGGGATTCCGCGATGA

Upstream 100 bases:

>100_bases
GTAACCTGACGCCTGATTTTATGGATGTCAGGAGGCGGAATTGCTCGATCGCAAGGCACTTCAGGCACTAGGTTGCTGGA
CAGGCTATCGGCTGGAGCGG

Downstream 100 bases:

>100_bases
ACCAAAAAAAAGCCCGCCTGAAGAGGCGGGCTGAATCCATATCAGAGGAGACATGGAGGAGACAGTTCGAACTATACCGG
TTTGTTTGACGCAATGCAAC

Product: ISBma1, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MEWPQGDSRTLSLYLKPVSRIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRY
QRVTERFAQACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
QVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQL
RHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGI
AVLQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR

Sequences:

>Translated_386_residues
MEWPQGDSRTLSLYLKPVSRIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRY
QRVTERFAQACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
QVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQL
RHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGI
AVLQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
>Mature_386_residues
MEWPQGDSRTLSLYLKPVSRIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRY
QRVTERFAQACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
QVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQL
RHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGI
AVLQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 45233; Mature: 45233

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWPQGDSRTLSLYLKPVSRIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
VWCERCGAARLEKLDWLGRYQRVTERFAQACEKLLQAASVQAVAAFYDLGWHTVKSIDKM
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQ
HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHH
LPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQL
HHHHHHHHHHHHHEEECHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
CCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCC
PACAEKAWGQWFEQAQQSGIAVLQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KRRAYGYRDEQYFFLKIRAAFPGIPR
HHHHCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MEWPQGDSRTLSLYLKPVSRIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
VWCERCGAARLEKLDWLGRYQRVTERFAQACEKLLQAASVQAVAAFYDLGWHTVKSIDKM
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQ
HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHH
LPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVDQANQL
HHHHHHHHHHHHHEEECHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
CCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCC
PACAEKAWGQWFEQAQQSGIAVLQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KRRAYGYRDEQYFFLKIRAAFPGIPR
HHHHCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]