| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721105
Identifier: 83721105
GI number: 83721105
Start: 3553890
End: 3555140
Strand: Direct
Name: 83721105
Synonym: BTH_I3116
Alternate gene names: NA
Gene position: 3553890-3555140 (Clockwise)
Preceding gene: 83719515
Following gene: 83720575
Centisome position: 93.3
GC content: 67.23
Gene sequence:
>1251_bases ATGAAGCAGCGGAATCTGATCCTGGCGATGGCCTGCGCCGCGCCCTTTATCTCGGCGTGCAGCGGCGGCGGCGGCGGCGG CGAATCGCAGCCGCTCGTCGAGGCGGCGCTCTGTCCGTCGGCGGTCGACTACAACACGGTCTACACGGGCGGCGGCGGCG ACGGCGAGCTCGTCAAGCTGCAGATCGACACGACGAAACTGACATGGCAGCTCACCTATGTCGAGTCCCCGATTCCGCAA ACGACGGGCACCGCGACGCCGACGCGCGCGGGCACGACGCAAAGCGGCACGCTGACGATGGAAACGCAGTTGCCGACGCA AAAGCTCAACAACTGCACGTATCGCCTGAACGGCGCGAGCCTCGACCCGAACCGTCCGGCGCGGATCTTCCTCGGCATGG GCGTCGTCGGCGGCACGATCCCCGGCAAGGAGATCCAGTACGGCGGCCTGCTCGGCCAGGGTGCGATTCCCGACACGACG TTCCCGTACTATCCGTTCATCGCGTTCTCGTCGCTCGAGACGAACATCGCGAACCTCGCCGGCACGTATAGCCAGCTCGG CTACGGCCAGGTCCCGTCGCAGAATTTCGCGCCGACGACGATCGACGCGAAGGTGACGATCAACCCCGACGGCACCTGGG TCCGCTGCGACACGACGGGCATCTACGCGGGCACCTGCCGGCAGCCGGGCACGAACCTCGTGCAGTCGGCCGACGGCACC GGCGCGTTCGAAACCGATCACTACCAGGGCCAGGTGAAGCCGACGCTCGCGACGATCCCGCAGGCGAAGGGCTTCGTCAT CGTCGGCAAGCTGCGCAACCAGCTCGTGCCGATCATGATCCGCACGGGCGTCGCGAACCCGAACCCGACGCCCGACGCGA ACGGCGTGCCGGGCCTCACCGCCGACGACGAATCGGGCATCTCGATCCTCGCGCCGCAGACGGCGGTTGCGGTCGGCTCG CAAAACGGCGAGTACATCGGCGTCGACAGCCAGTTCGACTACCGGAGCACCGCGCTCGTCAACACGCAGGCGACGCTCCT CGATCCGTTCCAGCCGTCGCAGGCGTCGCTTTCGACGCCGCTCAACCTCGACTACACGCAGACGGTGCCGGGCACGGTCA CGTCGACGCACGTCGGCGCGAGCAGCACGACGCCAACCGGCAAGTTCATCTTCACGGGCGGGGTGTTCGGCTTCCTCGAC ATGTCCAACTCGTCGTCGCCGTACTTCACGGTCGGCGCATTCGTGCAGTAA
Upstream 100 bases:
>100_bases ACATGCGCCGGGCCGGCCGCGCCGCAGCGGGCGAGATCGAGAGCGGCCGCCAGGGAGCCGGCCGCCGGATAAAGACAATT GTGGAGTTTGGAGGAGCAAC
Downstream 100 bases:
>100_bases CCGGCGCTCGGGAGGCCTTATGAAAAAAGCACTCTGCACGGCGCTCGGCGTCGCGGCGCTGACGCCGCTCGCCGCGCACG CGCAAAGCGCGGGCAGCAAC
Product: lipoprotein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKQRNLILAMACAAPFISACSGGGGGGESQPLVEAALCPSAVDYNTVYTGGGGDGELVKLQIDTTKLTWQLTYVESPIPQ TTGTATPTRAGTTQSGTLTMETQLPTQKLNNCTYRLNGASLDPNRPARIFLGMGVVGGTIPGKEIQYGGLLGQGAIPDTT FPYYPFIAFSSLETNIANLAGTYSQLGYGQVPSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNLVQSADGT GAFETDHYQGQVKPTLATIPQAKGFVIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLTADDESGISILAPQTAVAVGS QNGEYIGVDSQFDYRSTALVNTQATLLDPFQPSQASLSTPLNLDYTQTVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLD MSNSSSPYFTVGAFVQ
Sequences:
>Translated_416_residues MKQRNLILAMACAAPFISACSGGGGGGESQPLVEAALCPSAVDYNTVYTGGGGDGELVKLQIDTTKLTWQLTYVESPIPQ TTGTATPTRAGTTQSGTLTMETQLPTQKLNNCTYRLNGASLDPNRPARIFLGMGVVGGTIPGKEIQYGGLLGQGAIPDTT FPYYPFIAFSSLETNIANLAGTYSQLGYGQVPSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNLVQSADGT GAFETDHYQGQVKPTLATIPQAKGFVIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLTADDESGISILAPQTAVAVGS QNGEYIGVDSQFDYRSTALVNTQATLLDPFQPSQASLSTPLNLDYTQTVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLD MSNSSSPYFTVGAFVQ >Mature_416_residues MKQRNLILAMACAAPFISACSGGGGGGESQPLVEAALCPSAVDYNTVYTGGGGDGELVKLQIDTTKLTWQLTYVESPIPQ TTGTATPTRAGTTQSGTLTMETQLPTQKLNNCTYRLNGASLDPNRPARIFLGMGVVGGTIPGKEIQYGGLLGQGAIPDTT FPYYPFIAFSSLETNIANLAGTYSQLGYGQVPSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNLVQSADGT GAFETDHYQGQVKPTLATIPQAKGFVIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLTADDESGISILAPQTAVAVGS QNGEYIGVDSQFDYRSTALVNTQATLLDPFQPSQASLSTPLNLDYTQTVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLD MSNSSSPYFTVGAFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43371; Mature: 43371
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRNLILAMACAAPFISACSGGGGGGESQPLVEAALCPSAVDYNTVYTGGGGDGELVKL CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEEE QIDTTKLTWQLTYVESPIPQTTGTATPTRAGTTQSGTLTMETQLPTQKLNNCTYRLNGAS EEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCEEEEECCC LDPNRPARIFLGMGVVGGTIPGKEIQYGGLLGQGAIPDTTFPYYPFIAFSSLETNIANLA CCCCCCEEEEEEECEECCCCCCCEEEECCEECCCCCCCCCCCCCCEEEEECHHHHHHHHH GTYSQLGYGQVPSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNLVQSADGT HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHHHCCCCC GAFETDHYQGQVKPTLATIPQAKGFVIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLT CCEECCCCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCC ADDESGISILAPQTAVAVGSQNGEYIGVDSQFDYRSTALVNTQATLLDPFQPSQASLSTP CCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCCCC LNLDYTQTVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLDMSNSSSPYFTVGAFVQ CCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MKQRNLILAMACAAPFISACSGGGGGGESQPLVEAALCPSAVDYNTVYTGGGGDGELVKL CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEEE QIDTTKLTWQLTYVESPIPQTTGTATPTRAGTTQSGTLTMETQLPTQKLNNCTYRLNGAS EEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCEEEEECCC LDPNRPARIFLGMGVVGGTIPGKEIQYGGLLGQGAIPDTTFPYYPFIAFSSLETNIANLA CCCCCCEEEEEEECEECCCCCCCEEEECCEECCCCCCCCCCCCCCEEEEECHHHHHHHHH GTYSQLGYGQVPSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNLVQSADGT HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHHHCCCCC GAFETDHYQGQVKPTLATIPQAKGFVIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLT CCEECCCCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCC ADDESGISILAPQTAVAVGSQNGEYIGVDSQFDYRSTALVNTQATLLDPFQPSQASLSTP CCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCCCC LNLDYTQTVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLDMSNSSSPYFTVGAFVQ CCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA