| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720538
Identifier: 83720538
GI number: 83720538
Start: 3696058
End: 3697035
Strand: Direct
Name: 83720538
Synonym: BTH_I3242
Alternate gene names: NA
Gene position: 3696058-3697035 (Clockwise)
Preceding gene: 161723181
Following gene: 83720122
Centisome position: 97.03
GC content: 59.2
Gene sequence:
>978_bases ATGGCATCAGTTTTCTTTTCGTACACGCATATAGACGAGTCGCTGCGCGACCAGCTCGAAATCCACCTCTCGCTTATGAA GCGCGAGGGCCTCATTACCGCATGGCATGACCGGCGCATCGTCGCAGGCTCCGACATCGATGACAGCATCGATGAGCACC TTGAGAGCGCAGACATCATCTTGCTGCTAGTGAGCGCGAACTTCATCGCATCCGAGTACTGCTTCGCGACCGAGATGAAG CGTGCAATGGAGCGTCATAAGGCTGGTGAGGTGCGCGTCATCCCCGTCATCCTGCGCGCTTGTGACTGGCACAGCGCCCC GTTCGGAAAACTGAACGCAGTTCCGACCGATGGCCGGCCGGTGACCTCTTGGCCCAACCAAGATGAGGCGTTTGCCGACA TCACGAAGTCGATTCGCGCTGCTGTGAGTGCGACCGCGTCGTCATCGGCGCGAGCGCGGGTTGCGGCGCCGGCGCGCGAG GCAGGGGCGGCCCGCGCAGTGGCAGTGCCCGCCGCGAGTACGCAATTGCCGCGGTCTAGCAACATGCGCGTCAAACATCA GTTCTCGGACTTGGACAGAGATACGTTTGTTTCGGAGACGTTTGACTTTATCGCCCGTTTCTTCGATGGCTCGCTCCAGG AGCTGGAAAAGCGGCACGGCCAGTTCCAGGGTCGATTTACCCGAATCGATGCGCGCCGCTTCACTGCGAGCATCTACAAG GACGGCAAGAGTATCTCGCAGTGCAGCGTCTCCCACGGCGGCGCCTTCGGTGGGAGCAGCAACCGCGAGATTACGTACTC CAGTCAGATTTCAACGCATACCAACAGCTTCAACGAGGCGCTTACCATCGCGGAAGATAGCCAGACTCTGTACCTAAAGC CGATGATGAACATGGCCAGGGGAGTGTCCGAAAAGCTGTCTGACACCGGAGCCGCTGAGTATCTGTGGTCAATGTTGATG GAACCCGTCCAGCGCTGA
Upstream 100 bases:
>100_bases GCTCTAATGACGTCATCTAACTGACGTCACGGTCGCAGGAAAGAGGCCGCGGTGTTGCCTGCGGCCACAACAACGACGTG AATTTCGGCTGGAACGCGGC
Downstream 100 bases:
>100_bases GTTCATCCGCTCGAGGCACGGTAACGCCTTTTGAGCCACCCGCCTCGGGTCGTCCGCATGTATGATTCCTGTCTCAAGGT GCGTACGATTTCGATAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MASVFFSYTHIDESLRDQLEIHLSLMKREGLITAWHDRRIVAGSDIDDSIDEHLESADIILLLVSANFIASEYCFATEMK RAMERHKAGEVRVIPVILRACDWHSAPFGKLNAVPTDGRPVTSWPNQDEAFADITKSIRAAVSATASSSARARVAAPARE AGAARAVAVPAASTQLPRSSNMRVKHQFSDLDRDTFVSETFDFIARFFDGSLQELEKRHGQFQGRFTRIDARRFTASIYK DGKSISQCSVSHGGAFGGSSNREITYSSQISTHTNSFNEALTIAEDSQTLYLKPMMNMARGVSEKLSDTGAAEYLWSMLM EPVQR
Sequences:
>Translated_325_residues MASVFFSYTHIDESLRDQLEIHLSLMKREGLITAWHDRRIVAGSDIDDSIDEHLESADIILLLVSANFIASEYCFATEMK RAMERHKAGEVRVIPVILRACDWHSAPFGKLNAVPTDGRPVTSWPNQDEAFADITKSIRAAVSATASSSARARVAAPARE AGAARAVAVPAASTQLPRSSNMRVKHQFSDLDRDTFVSETFDFIARFFDGSLQELEKRHGQFQGRFTRIDARRFTASIYK DGKSISQCSVSHGGAFGGSSNREITYSSQISTHTNSFNEALTIAEDSQTLYLKPMMNMARGVSEKLSDTGAAEYLWSMLM EPVQR >Mature_324_residues ASVFFSYTHIDESLRDQLEIHLSLMKREGLITAWHDRRIVAGSDIDDSIDEHLESADIILLLVSANFIASEYCFATEMKR AMERHKAGEVRVIPVILRACDWHSAPFGKLNAVPTDGRPVTSWPNQDEAFADITKSIRAAVSATASSSARARVAAPAREA GAARAVAVPAASTQLPRSSNMRVKHQFSDLDRDTFVSETFDFIARFFDGSLQELEKRHGQFQGRFTRIDARRFTASIYKD GKSISQCSVSHGGAFGGSSNREITYSSQISTHTNSFNEALTIAEDSQTLYLKPMMNMARGVSEKLSDTGAAEYLWSMLME PVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000157 [H]
Pfam domain/function: PF01582 TIR [H]
EC number: NA
Molecular weight: Translated: 36052; Mature: 35921
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50104 TIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVFFSYTHIDESLRDQLEIHLSLMKREGLITAWHDRRIVAGSDIDDSIDEHLESADII CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCHHHHHHHCCCCEE LLLVSANFIASEYCFATEMKRAMERHKAGEVRVIPVILRACDWHSAPFGKLNAVPTDGRP EEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCC VTSWPNQDEAFADITKSIRAAVSATASSSARARVAAPAREAGAARAVAVPAASTQLPRSS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCEEEEECCCCCCCCCCC NMRVKHQFSDLDRDTFVSETFDFIARFFDGSLQELEKRHGQFQGRFTRIDARRFTASIYK CCEEEEHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH DGKSISQCSVSHGGAFGGSSNREITYSSQISTHTNSFNEALTIAEDSQTLYLKPMMNMAR CCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCEEEEHHHHHHHH GVSEKLSDTGAAEYLWSMLMEPVQR HHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure ASVFFSYTHIDESLRDQLEIHLSLMKREGLITAWHDRRIVAGSDIDDSIDEHLESADII CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCHHHHHHHCCCCEE LLLVSANFIASEYCFATEMKRAMERHKAGEVRVIPVILRACDWHSAPFGKLNAVPTDGRP EEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCC VTSWPNQDEAFADITKSIRAAVSATASSSARARVAAPAREAGAARAVAVPAASTQLPRSS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCEEEEECCCCCCCCCCC NMRVKHQFSDLDRDTFVSETFDFIARFFDGSLQELEKRHGQFQGRFTRIDARRFTASIYK CCEEEEHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH DGKSISQCSVSHGGAFGGSSNREITYSSQISTHTNSFNEALTIAEDSQTLYLKPMMNMAR CCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCEEEEHHHHHHHH GVSEKLSDTGAAEYLWSMLMEPVQR HHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]