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The map label for this gene is ycgE [C]

Identifier: 83720328

GI number: 83720328

Start: 2950971

End: 2951375

Strand: Reverse

Name: ycgE [C]

Synonym: BTH_I2588

Alternate gene names: 83720328

Gene position: 2951375-2950971 (Counterclockwise)

Preceding gene: 83720646

Following gene: 83719976

Centisome position: 77.48

GC content: 65.43

Gene sequence:

>405_bases
ATGACGTCGACGGTTGAGAAAGTCGTGTTGCCCCCGATTCCCGCAAAGCGCTACTTCACGATCGGGGAAGTGAGCGAATT
GTGCGGCGTGAAGCCTCACGTGCTGCGGTATTGGGAGCAGGAGTTCACGCAGTTGCGTCCGGTGAAGCGACGGGGGAACC
GCCGTTATTATCAGCATCATGAGGTGCTGCTGATCCGGCGGATTCGCGAGTTGCTGTACGAGCAGGGGTTCACGATCAAC
GGCGCCCGCAACCGGCTCGACACGGTCGGCAGCGAGCGAAGCGCGCCGCCCGAGCCCGATGAGCTCGAGCAGCACGCGGC
CGAGCTGGCCGCGCGCGAGGCCGTCGACGTCGCGCAGTTGCGCCGGGCGCTGCTCGACGTGATCGACGGACTCAAGCGCG
GCTGA

Upstream 100 bases:

>100_bases
GCGCTCGTCGAAAACGGCGCCGAGCCGGATCTCGTGCGTTAAGCCGGCGCTTTGCCTCCTGCGCGCTGCGCCCGCGCCCC
TTACCGACGGTTAACTGACG

Downstream 100 bases:

>100_bases
ACGCCGGGCAGGCCTGCGCGCGATTCGTAACTCAGGCGGCTGAACGTCATGGAAAAGCCCGAGCGAACCTTCGTTCGCTC
GGGCTTTTTTTCGAGCTGTT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR Family Regulatory Protein; Transcriptional Regulator MerR; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTIN
GARNRLDTVGSERSAPPEPDELEQHAAELAAREAVDVAQLRRALLDVIDGLKRG

Sequences:

>Translated_134_residues
MTSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTIN
GARNRLDTVGSERSAPPEPDELEQHAAELAAREAVDVAQLRRALLDVIDGLKRG
>Mature_133_residues
TSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTING
ARNRLDTVGSERSAPPEPDELEQHAAELAAREAVDVAQLRRALLDVIDGLKRG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15500; Mature: 15369

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHH
CCCCHHHHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EVLLIRRIRELLYEQGFTINGARNRLDTVGSERSAPPEPDELEQHAAELAAREAVDVAQL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRALLDVIDGLKRG
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TSTVEKVVLPPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLRPVKRRGNRRYYQHH
CCCHHHHHCCCCCCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EVLLIRRIRELLYEQGFTINGARNRLDTVGSERSAPPEPDELEQHAAELAAREAVDVAQL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRALLDVIDGLKRG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA