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The map label for this gene is tnpA [H]

Identifier: 83719976

GI number: 83719976

Start: 2947782

End: 2948264

Strand: Reverse

Name: tnpA [H]

Synonym: BTH_I2586

Alternate gene names: 83719976

Gene position: 2948264-2947782 (Counterclockwise)

Preceding gene: 83720328

Following gene: 83720896

Centisome position: 77.4

GC content: 63.77

Gene sequence:

>483_bases
TTGGAACGGGTGGAGTGGCCGCAAGGAGAAGAGCGCACGCTATCGCTGTATCTGAAGCCGGTCAGCAAGGTCATGTACTG
CGAGCAATGCGGGGCGCGCTGCCAGCAGATCCACGAGACGACCGTTCGTCGAGTGCGCGATCTGCCGCTGTTCGAATACC
GGGTGGTGTTGCATGTGCCTCGTCGCCGGGTCTGGTGTGAGCACTGCGGTGGCCCGCGACTGGAGAAGCTGGCGTGGCTG
GGCCGCTACCAGCGCGTGACGGAGCGGTTCGCCAAGGCCTGCGAGAAGCTGCTACAAGCGGCCAGCGTGCAAGCGGTCGC
AGCCTTCTACGAGTTGGGTTGGCACACGGTGAAATCGATCGACAAGATACGCTTGCGAGCGCGCGTGGCCGAGCCGGACT
GGTCGACGATCCGCTATCTGGCGATGGACGAGTTCGCGCTCTGGAACGGCCCCCTGAATCTCCGGACACAGTCTCCCGCT
TAA

Upstream 100 bases:

>100_bases
AGTGATTGCATAATCTGACACCTGATTCTAAGGATGTCGGAGGAAGCAATTGCTCGATCGAAAGGCACTTCAGGCACTGG
GCTGCTGGACCGGCTACCGG

Downstream 100 bases:

>100_bases
ACTAACGGGTAGGCATAGGACTGTGTTTTTGACTAACACCAGGCAGGAAGTGATGGAAGTGTTGACGGGCCCGGAGCGTC
GGCGGCGCTGGACGGCGGAA

Product: ISBma1, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCEHCGGPRLEKLAWL
GRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKIRLRARVAEPDWSTIRYLAMDEFALWNGPLNLRTQSPA

Sequences:

>Translated_160_residues
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCEHCGGPRLEKLAWL
GRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKIRLRARVAEPDWSTIRYLAMDEFALWNGPLNLRTQSPA
>Mature_160_residues
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCEHCGGPRLEKLAWL
GRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKIRLRARVAEPDWSTIRYLAMDEFALWNGPLNLRTQSPA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 18816; Mature: 18816

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
RRRVWCEHCGGPRLEKLAWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKIRLRARVAEPDWSTIRYLAMDEFALWNGPLNLRTQSPA
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
RRRVWCEHCGGPRLEKLAWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKIRLRARVAEPDWSTIRYLAMDEFALWNGPLNLRTQSPA
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]