| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ypjH [H]
Identifier: 83720116
GI number: 83720116
Start: 2440075
End: 2441139
Strand: Direct
Name: ypjH [H]
Synonym: BTH_I2162
Alternate gene names: 83720116
Gene position: 2440075-2441139 (Clockwise)
Preceding gene: 83721408
Following gene: 83720784
Centisome position: 64.06
GC content: 66.1
Gene sequence:
>1065_bases ATGAGAATTGCGCAGATCGCTCCGTTGACCGAATCGGTGCCGCCGAAGCTCTACGGCGGCACCGAGCGCGTCGTGTCGTA CATCACCGAGGCGCTCGTCGATCTGGGGCACGACGTGACGCTGTTCGCGAGCGGCGACTCGATCACGCGCGCGAAGCTCG ATGCGGTATGGCCGCGCGCGTTGCGGCTCGATTCGTCGATCCGCGACCGGATCGCGCCGCACATGCTGCTGATGGAGACC GTCGCACGCCGCGCGCGGGATTTCGACGTGCTCCATTTCCACATGGATTACTACTCGTTCTCGGTCTTCAAGCGGCAGGA CACGCCGTTCGTGACGACGCTGCACGGCCGCCTCGATTTGCCGGAGCAGCAGCCCGTGTTCGACACGTTCGACACCGCGC CCGTGATCTCGATCTCGAACGCGCAGCGCCACCCGATGCCGCAGGCGAAATGGCTGACGACGGTCTATCACGGGCTGCCG GAGACGCTCTACACGCCGCAGCCCGGCGAGCAGTCGTATCTCGCGTTCCTCGGCCGGATCTCGCCGGAAAAGCGCGTCGA CACGGCGATCCGGATCGCGCGGCGCTGCGGGATGCGCATCCGCATCGCGGCGAAGATCGACGCGGCGGACGAAGAGTATT TCGAGCGCGAGATCAAGCCGCTCTTCGCGCTGCCGCACGTCGAATACATCGGCGAGATCGCCGATCACGAGAAGGCCGCG TTCCTGTCGGGCGCGCATGCGCTGCTGTTTCCGATCGACTGGCCCGAGCCGTTCGGCCTCGTGATGATCGAGGCGATGGC GTGCGGCACGCCCGTCATCGCGTTCAATCGCGGCGCGGTGCCGGAGGTGATCGACGAGGGCGTGTCGGGCTTCATCGTCG AGGACGAGATCGGCGCCGCCGCGGCGGTGAACCGGCTGCACATGCTGTCGCGCGAGCGGGTGCGTGCGCGCTTCGAGGAG CGCTTCACTTCGCGCCGGATGGCTCAGCAATACGTCGACGTCTATCAATCGCTGATCCGCGCGCAGAAGCGCTCACGCTT CAAGGTGATCGATTCGGCGTCTTGA
Upstream 100 bases:
>100_bases CAATCGGCCCGCTGGCGCGCGCGCCGATCGCTAATAATGGCACTTTGCGGGCGTCGCCCGACGCCGGTCCGCTGGCCGGC CGCCACAGGAGATCGTACCC
Downstream 100 bases:
>100_bases GCGGGCGGCGAGGGCGGCGGCGTTGCCGCGCGTCGTGCCGCTTTCGTGGCGTTGCCGCGTCGCCGGCGCGCTGGCGACGG GCACGCGGCCCTTCGCCGCA
Product: group 1 family glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRIAQIAPLTESVPPKLYGGTERVVSYITEALVDLGHDVTLFASGDSITRAKLDAVWPRALRLDSSIRDRIAPHMLLMET VARRARDFDVLHFHMDYYSFSVFKRQDTPFVTTLHGRLDLPEQQPVFDTFDTAPVISISNAQRHPMPQAKWLTTVYHGLP ETLYTPQPGEQSYLAFLGRISPEKRVDTAIRIARRCGMRIRIAAKIDAADEEYFEREIKPLFALPHVEYIGEIADHEKAA FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAFNRGAVPEVIDEGVSGFIVEDEIGAAAAVNRLHMLSRERVRARFEE RFTSRRMAQQYVDVYQSLIRAQKRSRFKVIDSAS
Sequences:
>Translated_354_residues MRIAQIAPLTESVPPKLYGGTERVVSYITEALVDLGHDVTLFASGDSITRAKLDAVWPRALRLDSSIRDRIAPHMLLMET VARRARDFDVLHFHMDYYSFSVFKRQDTPFVTTLHGRLDLPEQQPVFDTFDTAPVISISNAQRHPMPQAKWLTTVYHGLP ETLYTPQPGEQSYLAFLGRISPEKRVDTAIRIARRCGMRIRIAAKIDAADEEYFEREIKPLFALPHVEYIGEIADHEKAA FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAFNRGAVPEVIDEGVSGFIVEDEIGAAAAVNRLHMLSRERVRARFEE RFTSRRMAQQYVDVYQSLIRAQKRSRFKVIDSAS >Mature_354_residues MRIAQIAPLTESVPPKLYGGTERVVSYITEALVDLGHDVTLFASGDSITRAKLDAVWPRALRLDSSIRDRIAPHMLLMET VARRARDFDVLHFHMDYYSFSVFKRQDTPFVTTLHGRLDLPEQQPVFDTFDTAPVISISNAQRHPMPQAKWLTTVYHGLP ETLYTPQPGEQSYLAFLGRISPEKRVDTAIRIARRCGMRIRIAAKIDAADEEYFEREIKPLFALPHVEYIGEIADHEKAA FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAFNRGAVPEVIDEGVSGFIVEDEIGAAAAVNRLHMLSRERVRARFEE RFTSRRMAQQYVDVYQSLIRAQKRSRFKVIDSAS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR016040 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 40086; Mature: 40086
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLTESVPPKLYGGTERVVSYITEALVDLGHDVTLFASGDSITRAKLDAVWPRA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCHHH LRLDSSIRDRIAPHMLLMETVARRARDFDVLHFHMDYYSFSVFKRQDTPFVTTLHGRLDL HHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHEEEEEECCCCCEEEEECCCCCC PEQQPVFDTFDTAPVISISNAQRHPMPQAKWLTTVYHGLPETLYTPQPGEQSYLAFLGRI CCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHCC SPEKRVDTAIRIARRCGMRIRIAAKIDAADEEYFEREIKPLFALPHVEYIGEIADHEKAA CCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAFNRGAVPEVIDEGVSGFIVEDEIGAA HHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEECCCCHH AAVNRLHMLSRERVRARFEERFTSRRMAQQYVDVYQSLIRAQKRSRFKVIDSAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRIAQIAPLTESVPPKLYGGTERVVSYITEALVDLGHDVTLFASGDSITRAKLDAVWPRA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCHHH LRLDSSIRDRIAPHMLLMETVARRARDFDVLHFHMDYYSFSVFKRQDTPFVTTLHGRLDL HHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHEEEEEECCCCCEEEEECCCCCC PEQQPVFDTFDTAPVISISNAQRHPMPQAKWLTTVYHGLPETLYTPQPGEQSYLAFLGRI CCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHCC SPEKRVDTAIRIARRCGMRIRIAAKIDAADEEYFEREIKPLFALPHVEYIGEIADHEKAA CCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAFNRGAVPEVIDEGVSGFIVEDEIGAA HHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEEECCCCHH AAVNRLHMLSRERVRARFEERFTSRRMAQQYVDVYQSLIRAQKRSRFKVIDSAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]