| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721408
Identifier: 83721408
GI number: 83721408
Start: 2438528
End: 2439706
Strand: Direct
Name: 83721408
Synonym: BTH_I2161
Alternate gene names: NA
Gene position: 2438528-2439706 (Clockwise)
Preceding gene: 83719884
Following gene: 83720116
Centisome position: 64.02
GC content: 71.16
Gene sequence:
>1179_bases ATGCCCCCACTCACCGCACTCGCCATCGCCAATTACCGCTCGCTGCGCGATCTGATCGTGCCGCTCGCGACGCTCAACGT GATCACCGGGCCGAACGGCAGCGGCAAGTCCAGCCTGTATCGCGCGCTGCGCCTGCTCGCGGACACTGCGCAAGGCCGCG TGATTCCGTCGCTCGCCCGTGAGGGCGGGCTGCCGTCGACGCTATGGGCGGGCCCCGAGCGCTTCTCGCGCGGGATGCTG ACAGGCGAGGTGCCGGTGACGGGCACGGTGCGCAACGAGCCCGTGAGCCTGAAGCTCGGCTTCGCGTGCGAGGATTTCGG CTACGCGATCGATCTCGGGCTGCCGCCGCTCAACAGCGAAACCGAGTTCGGGCTCGACCCGGTCGTCAAGCGCGAGTGCA TCTGGAGCGGACCGATGCCGCGGCCGTCGACGCTGCTCGTCGACCGGCGCGGCGCGCAATTGCGCACGCGCGACGAGACG GGCGAGTGGCGGACCGTGCCGCAGCCGATCGCGAGCTTCGACAGCATGATGACCGAGTTCGCCGACCCACGCGGCGCGCC GGAGATGATCGCGGTGCGCGAGCGCATCCGCTCGTGGCGCTTCTACGACCACCTGCGCACCGATGCGCTTGCGCCCGCTC GGCTTGCGCAAGTCGGCACGCACACGCCGGTGCTGTCCGACGACGGCGGCGATCTGGCGGCCGCGCTGCAGACGATCTAC GAAATCGGCGACGCCGCCGCGCTCGACGCGGCGATCGGCGACGCATTTCCCGGCGCGCGGCTCGAGATCGACAATCCGGG CAAGCGCGGCCGCTTCGAGGTGATGATGCGGCAACCGGGCCTGTTGCGGCCGCTGCGCGCGGCCGAACTGTCGGACGGCA CGTTACGCTACCTGCTGCTCGTCGCGGCGCTGCTGACGCCGCGCCCGCCCGCGCTCCTCGTGCTGAACGAACCGGAGACG AGCCTGCACCCGGACCTGCTGCCCGCGCTCGGGCGGCTGATCGCGCAGGCGGCCGAGCGCTCGCAGGTGATCGTCGTGTC GCATGCGGCGCGGCTCGTCGCGTCGCTCGAACGCGAGCCGGACAGCCATTCGATCGTGCTCGAGAAGGCACTCGGCGCGA CGCGGATCGTCGATGCGGACGCGCTGGAGTTGCCGGCATGGAAGTGGCCGGCGCGATAG
Upstream 100 bases:
>100_bases TCGTGGCCGATCCGCGGATGCGTCGATCCATCGATCCGTCGATGCGCGCGATCCGTCGATTCGCCGATTCGATCACTGTC TTTCGACACCCTGTTTCCCG
Downstream 100 bases:
>100_bases CGGCTCGGCCGGCGGCGGCCGGGCGGGAGAACAGCCGGGGGCGAAAGGCGGGAGAGAAAAGCAGCGGGGAAAAGCGGCGA GGAAAGGCAGCGAGGTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; SMC Domain Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; DNA Replication And Repair Protein RecF; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPPLTALAIANYRSLRDLIVPLATLNVITGPNGSGKSSLYRALRLLADTAQGRVIPSLAREGGLPSTLWAGPERFSRGML TGEVPVTGTVRNEPVSLKLGFACEDFGYAIDLGLPPLNSETEFGLDPVVKRECIWSGPMPRPSTLLVDRRGAQLRTRDET GEWRTVPQPIASFDSMMTEFADPRGAPEMIAVRERIRSWRFYDHLRTDALAPARLAQVGTHTPVLSDDGGDLAAALQTIY EIGDAAALDAAIGDAFPGARLEIDNPGKRGRFEVMMRQPGLLRPLRAAELSDGTLRYLLLVAALLTPRPPALLVLNEPET SLHPDLLPALGRLIAQAAERSQVIVVSHAARLVASLEREPDSHSIVLEKALGATRIVDADALELPAWKWPAR
Sequences:
>Translated_392_residues MPPLTALAIANYRSLRDLIVPLATLNVITGPNGSGKSSLYRALRLLADTAQGRVIPSLAREGGLPSTLWAGPERFSRGML TGEVPVTGTVRNEPVSLKLGFACEDFGYAIDLGLPPLNSETEFGLDPVVKRECIWSGPMPRPSTLLVDRRGAQLRTRDET GEWRTVPQPIASFDSMMTEFADPRGAPEMIAVRERIRSWRFYDHLRTDALAPARLAQVGTHTPVLSDDGGDLAAALQTIY EIGDAAALDAAIGDAFPGARLEIDNPGKRGRFEVMMRQPGLLRPLRAAELSDGTLRYLLLVAALLTPRPPALLVLNEPET SLHPDLLPALGRLIAQAAERSQVIVVSHAARLVASLEREPDSHSIVLEKALGATRIVDADALELPAWKWPAR >Mature_391_residues PPLTALAIANYRSLRDLIVPLATLNVITGPNGSGKSSLYRALRLLADTAQGRVIPSLAREGGLPSTLWAGPERFSRGMLT GEVPVTGTVRNEPVSLKLGFACEDFGYAIDLGLPPLNSETEFGLDPVVKRECIWSGPMPRPSTLLVDRRGAQLRTRDETG EWRTVPQPIASFDSMMTEFADPRGAPEMIAVRERIRSWRFYDHLRTDALAPARLAQVGTHTPVLSDDGGDLAAALQTIYE IGDAAALDAAIGDAFPGARLEIDNPGKRGRFEVMMRQPGLLRPLRAAELSDGTLRYLLLVAALLTPRPPALLVLNEPETS LHPDLLPALGRLIAQAAERSQVIVVSHAARLVASLEREPDSHSIVLEKALGATRIVDADALELPAWKWPAR
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42491; Mature: 42360
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLTALAIANYRSLRDLIVPLATLNVITGPNGSGKSSLYRALRLLADTAQGRVIPSLAR CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH EGGLPSTLWAGPERFSRGMLTGEVPVTGTVRNEPVSLKLGFACEDFGYAIDLGLPPLNSE CCCCCCHHHCCHHHHHCCCEECCCCEEECCCCCCEEEEECCEECCCCEEEECCCCCCCCC TEFGLDPVVKRECIWSGPMPRPSTLLVDRRGAQLRTRDETGEWRTVPQPIASFDSMMTEF CCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH ADPRGAPEMIAVRERIRSWRFYDHLRTDALAPARLAQVGTHTPVLSDDGGDLAAALQTIY CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHH EIGDAAALDAAIGDAFPGARLEIDNPGKRGRFEVMMRQPGLLRPLRAAELSDGTLRYLLL HHCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHH VAALLTPRPPALLVLNEPETSLHPDLLPALGRLIAQAAERSQVIVVSHAARLVASLEREP HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCC DSHSIVLEKALGATRIVDADALELPAWKWPAR CCCHHHHHHHCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure PPLTALAIANYRSLRDLIVPLATLNVITGPNGSGKSSLYRALRLLADTAQGRVIPSLAR CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH EGGLPSTLWAGPERFSRGMLTGEVPVTGTVRNEPVSLKLGFACEDFGYAIDLGLPPLNSE CCCCCCHHHCCHHHHHCCCEECCCCEEECCCCCCEEEEECCEECCCCEEEECCCCCCCCC TEFGLDPVVKRECIWSGPMPRPSTLLVDRRGAQLRTRDETGEWRTVPQPIASFDSMMTEF CCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH ADPRGAPEMIAVRERIRSWRFYDHLRTDALAPARLAQVGTHTPVLSDDGGDLAAALQTIY CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHH EIGDAAALDAAIGDAFPGARLEIDNPGKRGRFEVMMRQPGLLRPLRAAELSDGTLRYLLL HHCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHH VAALLTPRPPALLVLNEPETSLHPDLLPALGRLIAQAAERSQVIVVSHAARLVASLEREP HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCC DSHSIVLEKALGATRIVDADALELPAWKWPAR CCCHHHHHHHCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA