Click here to switch to the map view.

The map label for this gene is paiB [H]

Identifier: 83719539

GI number: 83719539

Start: 3236520

End: 3237158

Strand: Direct

Name: paiB [H]

Synonym: BTH_I2821

Alternate gene names: 83719539

Gene position: 3236520-3237158 (Clockwise)

Preceding gene: 83720087

Following gene: 83721143

Centisome position: 84.97

GC content: 67.45

Gene sequence:

>639_bases
ATGTACGTTCCCGCCCATTTCGAAGAAAACCGCACCGACGTCCTGCACGCGCTGATCGCGCAGCACCCGTTTGGCATCCT
GATCACGCATGGCGCCGGCGGGCTCGATGCGAATCACATTCCGTTCGACCTCGCGCCGGGCGACGGAACGCTCGGCGTGC
TGCGCGCGCACGTCGCGCGCGCGAATCCCGTCTGGCAACAGGTGTCGAGCGGCGACGAAGTCCTCGTCGTGTTCCGCGCG
GGCGACGCCTATATCTCGCCGAACTGGTATCCGAGCAAGCACGAATCCCACCGGCAAGTGCCGACGTGGAACTACGTCGT
CGTTCACGCGCACGGACGAATCGCCGTTCGCGACGACGAGCCGTTCGTGCGCGGCGTGGTCGCGCGCCTCACGCGCACGC
ACGAAGCGGCGCAGCCCGCGCCGTGGAGAATCGGCGACGCGCCGACCGACTACATCGACGCGATGCTGCAGTCGATCGTC
GGCCTGCAGATCGACATCACGCGGCTCGCCGGCAAATGCAAGCTTGGCCAGAACAAGGAGGCGCGCGACATTCGCGGCGC
GGGCGAAGCGTTGAAGGCGTGCGGCGGCGACGCGATCGGCGACCTGATGCTCGCGAAGGCCGCCGAGAAGCCGGAATAG

Upstream 100 bases:

>100_bases
GGCTCAACCGGCTCTGCAGAATAAACCCGTTCGAGGCGACAATAGCCGCATCGTCTAACCTCGATGCGCTGCGCGAACGC
AGCCCGACCGCGGAGCCGCC

Downstream 100 bases:

>100_bases
ACGCGACGGCGGCGCGGATTCGCTTCGTTCGGCTCCCCGAGCATCTGCGTTGCGCGCGATGCCGCGGGCCGTCTTCTTCG
CCGGACGAACCGCGTGCCGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MYVPAHFEENRTDVLHALIAQHPFGILITHGAGGLDANHIPFDLAPGDGTLGVLRAHVARANPVWQQVSSGDEVLVVFRA
GDAYISPNWYPSKHESHRQVPTWNYVVVHAHGRIAVRDDEPFVRGVVARLTRTHEAAQPAPWRIGDAPTDYIDAMLQSIV
GLQIDITRLAGKCKLGQNKEARDIRGAGEALKACGGDAIGDLMLAKAAEKPE

Sequences:

>Translated_212_residues
MYVPAHFEENRTDVLHALIAQHPFGILITHGAGGLDANHIPFDLAPGDGTLGVLRAHVARANPVWQQVSSGDEVLVVFRA
GDAYISPNWYPSKHESHRQVPTWNYVVVHAHGRIAVRDDEPFVRGVVARLTRTHEAAQPAPWRIGDAPTDYIDAMLQSIV
GLQIDITRLAGKCKLGQNKEARDIRGAGEALKACGGDAIGDLMLAKAAEKPE
>Mature_212_residues
MYVPAHFEENRTDVLHALIAQHPFGILITHGAGGLDANHIPFDLAPGDGTLGVLRAHVARANPVWQQVSSGDEVLVVFRA
GDAYISPNWYPSKHESHRQVPTWNYVVVHAHGRIAVRDDEPFVRGVVARLTRTHEAAQPAPWRIGDAPTDYIDAMLQSIV
GLQIDITRLAGKCKLGQNKEARDIRGAGEALKACGGDAIGDLMLAKAAEKPE

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=159, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23025; Mature: 23025

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVPAHFEENRTDVLHALIAQHPFGILITHGAGGLDANHIPFDLAPGDGTLGVLRAHVAR
CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
ANPVWQQVSSGDEVLVVFRAGDAYISPNWYPSKHESHRQVPTWNYVVVHAHGRIAVRDDE
CCHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCC
PFVRGVVARLTRTHEAAQPAPWRIGDAPTDYIDAMLQSIVGLQIDITRLAGKCKLGQNKE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHCCCCCCCCCCC
ARDIRGAGEALKACGGDAIGDLMLAKAAEKPE
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYVPAHFEENRTDVLHALIAQHPFGILITHGAGGLDANHIPFDLAPGDGTLGVLRAHVAR
CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
ANPVWQQVSSGDEVLVVFRAGDAYISPNWYPSKHESHRQVPTWNYVVVHAHGRIAVRDDE
CCHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCC
PFVRGVVARLTRTHEAAQPAPWRIGDAPTDYIDAMLQSIVGLQIDITRLAGKCKLGQNKE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHCCCCCCCCCCC
ARDIRGAGEALKACGGDAIGDLMLAKAAEKPE
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]