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The map label for this gene is 83720087

Identifier: 83720087

GI number: 83720087

Start: 3235978

End: 3236574

Strand: Direct

Name: 83720087

Synonym: BTH_I2820

Alternate gene names: NA

Gene position: 3235978-3236574 (Clockwise)

Preceding gene: 83721029

Following gene: 83719539

Centisome position: 84.95

GC content: 67.84

Gene sequence:

>597_bases
ATGACGACCATCGACTTGAATGCGGGCGCCTTGGCGCCCGTGGCCGACGAGATCGACGCCGTCGACCTGCGGGTGAGCGG
CGCGATTCCGCGCGAGCCGAACGGCGTGCTCGTGCGCAACGGGCCCAATCCGCTGCGCGGCCGCTTCGACGGCAGCGACG
TGCTGTCCTGGTGGCCGGAGGACGCAATGCTGCACGCGATATCGTTCGACCACGGCCGCGCGACACGCTACCGCAACGCT
GGGCGCGCACGCAGCGCTGGGCGCGCGTGCACGATCCGGCGCGGGCGCCGTCGCTCGTCGACACGAATCCGAACGTCACC
GAGCGACGGCATTCCGACGATGCGGGCGCATCTCGGGATCATTCCGGATCACCGGAAACCGCTCAACCGGCTCAACCGGC
TCAACCGGCTCAACCGGCTCAACCGGCTCAACCGGCTCAACCGGCTCAACCGGCTCTGCAGAATAAACCCGTTCGAGGCG
ACAATAGCCGCATCGTCTAACCTCGATGCGCTGCGCGAACGCAGCCCGACCGCGGAGCCGCCATGTACGTTCCCGCCCAT
TTCGAAGAAAACCGCACCGACGTCCTGCACGCGCTGA

Upstream 100 bases:

>100_bases
ATGGCCCGCCGACGTGCGCGAACACGCGCTCGCGCTCGCGTCGCCCGACGCCGATGCCCCGTCGCCCGACGCCCGCTGAC
CCGCCCCGGCGCACGACACC

Downstream 100 bases:

>100_bases
TCGCGCAGCACCCGTTTGGCATCCTGATCACGCATGGCGCCGGCGGGCTCGATGCGAATCACATTCCGTTCGACCTCGCG
CCGGGCGACGGAACGCTCGG

Product: carotenoid 9,10-9,10 cleavage dioxygenase

Products: NA

Alternate protein names: Dioxygenase; Carotenoid 9 10-9 10 Cleavage Dioxygenase; Retinal Pigment Epithelial Membrane Protein; Lignostilbene-Alpha Beta-Dioxygenase

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTTIDLNAGALAPVADEIDAVDLRVSGAIPREPNGVLVRNGPNPLRGRFDGSDVLSWWPEDAMLHAISFDHGRATRYRNA
GRARSAGRACTIRRGRRRSSTRIRTSPSDGIPTMRAHLGIIPDHRKPLNRLNRLNRLNRLNRLNRLNRLNRLCRINPFEA
TIAASSNLDALRERSPTAEPPCTFPPISKKTAPTSCTR

Sequences:

>Translated_198_residues
MTTIDLNAGALAPVADEIDAVDLRVSGAIPREPNGVLVRNGPNPLRGRFDGSDVLSWWPEDAMLHAISFDHGRATRYRNA
GRARSAGRACTIRRGRRRSSTRIRTSPSDGIPTMRAHLGIIPDHRKPLNRLNRLNRLNRLNRLNRLNRLNRLCRINPFEA
TIAASSNLDALRERSPTAEPPCTFPPISKKTAPTSCTR
>Mature_197_residues
TTIDLNAGALAPVADEIDAVDLRVSGAIPREPNGVLVRNGPNPLRGRFDGSDVLSWWPEDAMLHAISFDHGRATRYRNAG
RARSAGRACTIRRGRRRSSTRIRTSPSDGIPTMRAHLGIIPDHRKPLNRLNRLNRLNRLNRLNRLNRLNRLCRINPFEAT
IAASSNLDALRERSPTAEPPCTFPPISKKTAPTSCTR

Specific function: Unknown

COG id: COG3670

COG function: function code Q; Lignostilbene-alpha,beta-dioxygenase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22025; Mature: 21894

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDLNAGALAPVADEIDAVDLRVSGAIPREPNGVLVRNGPNPLRGRFDGSDVLSWWPE
CEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCC
DAMLHAISFDHGRATRYRNAGRARSAGRACTIRRGRRRSSTRIRTSPSDGIPTMRAHLGI
CCEEEEEECCCCCHHHHHCCCCCCCCCCEEEHHCCCCCCCCEEECCCCCCCCHHHHHCCC
IPDHRKPLNRLNRLNRLNRLNRLNRLNRLNRLCRINPFEATIAASSNLDALRERSPTAEP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCCC
PCTFPPISKKTAPTSCTR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTIDLNAGALAPVADEIDAVDLRVSGAIPREPNGVLVRNGPNPLRGRFDGSDVLSWWPE
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCC
DAMLHAISFDHGRATRYRNAGRARSAGRACTIRRGRRRSSTRIRTSPSDGIPTMRAHLGI
CCEEEEEECCCCCHHHHHCCCCCCCCCCEEEHHCCCCCCCCEEECCCCCCCCHHHHHCCC
IPDHRKPLNRLNRLNRLNRLNRLNRLNRLNRLCRINPFEATIAASSNLDALRERSPTAEP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCCC
PCTFPPISKKTAPTSCTR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA