| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is flgE [H]
Identifier: 83719411
GI number: 83719411
Start: 275896
End: 277137
Strand: Direct
Name: flgE [H]
Synonym: BTH_I0243
Alternate gene names: 83719411
Gene position: 275896-277137 (Clockwise)
Preceding gene: 83720138
Following gene: 83720527
Centisome position: 7.24
GC content: 63.53
Gene sequence:
>1242_bases ATGGGCTATCAACAAGGTTTGAGCGGTTTGGCGGGCGCGTCGAGCGATCTCGACGTGATCGGCAACAACATCGCGAACGC GAACACGGTGGGCTTCAAGGGGAGCACCGCGCAGTTTTCCGACATGTACGCGAATTCGGTCGCGTCGGCCGTCAACAATC CGATCGGCATCGGCACGATGCTCGCGTCGGTGCAGCAGCAGTTCAGCCAGGGCACGATCACGTCGAGCACGTCGTCGCTG AACGTCGCGATCAACGGCAACGGCTTCTTCCAGATGTCGAACAACGGCGTGCTCACGTACTCGCGCGACGGCACGTTCCA GCGCGACAAGAACGGCTACATCGTCAATTCGCAGGGCCTGAACCTGATGGGCTACCAGGCGGACAAGAACGGCGTGATCA ACCCCGCGCAGACCGTGCCGCTGCAGGCGCCGACGAACAATATCGCGCCCACCGCGACGACCAAGATCACGGGCCAGTTC AACCTCAACTCGCAGGACACGGTGCCGACCAACACGCCGTTCAACTATACGGATTCCACGACGTACAACTTCCAGACGGC GGTTCAGGTGTACGACTCGCTCGGCGGCTCGCAGCAGGTCAACATGTATTTCGTGAAGTCGGCGGCGGGCACGTGGGAAG CGTACGCGGGCGTCAAGAACCAGACGCCGACCGATCTCGGCACGGTCACGTTCGACACGTCGGGCGCGATCAAGAGCACG ACGCTGCCGGGTTCGACCACGCCGACCACGACGCTCGGCCAGTTCCAGTTCTCGATTCCGAACACGGACGGCTCCGCGAC GCCGCAGGCGCTCAAGCTCGACCTGACGGGCACGACGCAGTACGGCGGCAAGGACGGCGTGACCAACCTCGCGCAGGACG GCTTCGCGAGCGGCACGCTCACGACCTTCTCGATCGGCAACGACGGCAAGGTGACCGGCAACTACTCGAACGGCCAGACG GCGACGCTCGGCCAGATCGTGCTCGCGAACTTCAACAACCCGAACGGCCTCGTGAACGTCGGCAACAACCAGTACGTCGA GACGGCCGCATCGGGCGTGCCGCAAATCTCCGCGCCCGGCAGCACGAACCACGGCACGCTGCAGGGCAGCGCGCTCGAAA ACTCGAACGTCGACCTGACGAGCCAGCTCGTGAAGCTGATCACCGCGCAGCGCAACTACCAGGCGAACGCGCAGACGATC AAGACGCAGCAGACCGTCGACCAGACGCTCATCAACCTGTAA
Upstream 100 bases:
>100_bases GCCAGGTCGCGTCGATCTTCCCGAACACCACGAAGAGCGCGTCGACGGGCAGCGCCTCGTCTTCCACCAACTAATCCAGC ACTTCGCTACGGAGACCGAG
Downstream 100 bases:
>100_bases GCGGCCTTCGCGGACAACAGCCAGCCATGGACCGACTGATCTATACGGCGATGACGGGCGCGACGCAGTCGCTCGAGCAG CAGTCCGTCGTCGCGAACAA
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MGYQQGLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSSTSSL NVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGYQADKNGVINPAQTVPLQAPTNNIAPTATTKITGQF NLNSQDTVPTNTPFNYTDSTTYNFQTAVQVYDSLGGSQQVNMYFVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKST TLPGSTTPTTTLGQFQFSIPNTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQT ATLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQRNYQANAQTI KTQQTVDQTLINL
Sequences:
>Translated_413_residues MGYQQGLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSSTSSL NVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGYQADKNGVINPAQTVPLQAPTNNIAPTATTKITGQF NLNSQDTVPTNTPFNYTDSTTYNFQTAVQVYDSLGGSQQVNMYFVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKST TLPGSTTPTTTLGQFQFSIPNTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQT ATLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQRNYQANAQTI KTQQTVDQTLINL >Mature_412_residues GYQQGLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQQQFSQGTITSSTSSLN VAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGYQADKNGVINPAQTVPLQAPTNNIAPTATTKITGQFN LNSQDTVPTNTPFNYTDSTTYNFQTAVQVYDSLGGSQQVNMYFVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKSTT LPGSTTPTTTLGQFQFSIPNTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQTA TLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVKLITAQRNYQANAQTIK TQQTVDQTLINL
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=418, Percent_Identity=40.9090909090909, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI1787318, Length=164, Percent_Identity=32.3170731707317, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 43040; Mature: 42908
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQQGLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTM CCHHHHCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGL HHHHHHHHHCCCEECCCCEEEEEECCCEEEEECCCEEEEECCCCCEEECCCCEEEECCCC NLMGYQADKNGVINPAQTVPLQAPTNNIAPTATTKITGQFNLNSQDTVPTNTPFNYTDST EEEEEECCCCCCCCCHHCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC TYNFQTAVQVYDSLGGSQQVNMYFVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKST EEEHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCEEEEEECCCCEEEE TLPGSTTPTTTLGQFQFSIPNTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTL ECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCE TTFSIGNDGKVTGNYSNGQTATLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPG EEEEECCCCEEEECCCCCCEEEEEEEEEEECCCCCCEEECCCCCEEHHHHCCCCEECCCC STNHGTLQGSALENSNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL CCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GYQQGLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTM CHHHHCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH LASVQQQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGL HHHHHHHHHCCCEECCCCEEEEEECCCEEEEECCCEEEEECCCCCEEECCCCEEEECCCC NLMGYQADKNGVINPAQTVPLQAPTNNIAPTATTKITGQFNLNSQDTVPTNTPFNYTDST EEEEEECCCCCCCCCHHCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC TYNFQTAVQVYDSLGGSQQVNMYFVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKST EEEHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCEEEEEECCCCEEEE TLPGSTTPTTTLGQFQFSIPNTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTL ECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCE TTFSIGNDGKVTGNYSNGQTATLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPG EEEEECCCCEEEECCCCCCEEEEEEEEEEECCCCCCEEECCCCCEEHHHHCCCCEECCCC STNHGTLQGSALENSNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLINL CCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]