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The map label for this gene is flgD [H]

Identifier: 83720138

GI number: 83720138

Start: 275033

End: 275869

Strand: Direct

Name: flgD [H]

Synonym: BTH_I0242

Alternate gene names: 83720138

Gene position: 275033-275869 (Clockwise)

Preceding gene: 83720057

Following gene: 83719411

Centisome position: 7.22

GC content: 68.46

Gene sequence:

>837_bases
ATGACATCCTCCTTCACCACCATCGGCGGCAGCGGCACGACCGTCAACAGCCTGCCGTACGACACGATGAGCTCGAACGG
GCAGTCGTCGAGCCCGTCGGGCACGTCGAACACGCCGGGCGGCACGGCGGGCGCGAGCGGCGCGAGTTCGGGCATCAACG
TCGCGAGCTCGCTGTCGACGACGTCCGCGGCCGACCTGCAGACGACGTTCCTGAAGCTGCTCGTCACGCAGTTGCAGAAC
CAGGACCCGACGAGCCCCGTCGACAGCTCGCAGATGACCTCGCAGCTCGCGCAGATCAACACCGTGAGCGGCATCGCGCA
GTTGAACACCGCGCTCACGTCGCTGTCGTCGCAACTCACCGCGGGCCAGCAGACGCAGGCGGCGATGCTGATCGGCTCGA
ACGTGCTCGCGCCGGGCAACACCGTGCCCGTCAAGGGCGGCGCGGCGTCGCCGTTCGGCGTGCAGCTCACGAGCGCCGTG
TCGAACCTGACGATCACCGTGAAGAACGCGTCGGGCGCCGTCGTCAACACGATCAACGCGGGCGCGCAAGCGGCGGGCAC
CGTGCCGTTCAACTGGACGCCGACCGACGCCGCAGGCAACACGCTGCCCGACGGCACTTACTCGATCAGCGCGAGCTACA
CGGACACGTCCGGCAAGCAGTACGCGCCGACGACGCTGTCGTCCGCGCAGGTGCTGAGCGTCATCAAGCAGGCGGACGGC
ACGCCGGGGCTCGTGCTGTCGAACGGCGCGACGGTCGGCTTCAGCCAGGTCGCGTCGATCTTCCCGAACACCACGAAGAG
CGCGTCGACGGGCAGCGCCTCGTCTTCCACCAACTAA

Upstream 100 bases:

>100_bases
ACACCGCGAAGCAGCTGATGCTGAAGACGCTGACGATCGGCAGCTGACGCGCTCCTTTTTCATCGATCGATATACGCATA
GCAGAGGAAGGCGAACCCGG

Downstream 100 bases:

>100_bases
TCCAGCACTTCGCTACGGAGACCGAGATGGGCTATCAACAAGGTTTGAGCGGTTTGGCGGGCGCGTCGAGCGATCTCGAC
GTGATCGGCAACAACATCGC

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTSSFTTIGGSGTTVNSLPYDTMSSNGQSSSPSGTSNTPGGTAGASGASSGINVASSLSTTSAADLQTTFLKLLVTQLQN
QDPTSPVDSSQMTSQLAQINTVSGIAQLNTALTSLSSQLTAGQQTQAAMLIGSNVLAPGNTVPVKGGAASPFGVQLTSAV
SNLTITVKNASGAVVNTINAGAQAAGTVPFNWTPTDAAGNTLPDGTYSISASYTDTSGKQYAPTTLSSAQVLSVIKQADG
TPGLVLSNGATVGFSQVASIFPNTTKSASTGSASSSTN

Sequences:

>Translated_278_residues
MTSSFTTIGGSGTTVNSLPYDTMSSNGQSSSPSGTSNTPGGTAGASGASSGINVASSLSTTSAADLQTTFLKLLVTQLQN
QDPTSPVDSSQMTSQLAQINTVSGIAQLNTALTSLSSQLTAGQQTQAAMLIGSNVLAPGNTVPVKGGAASPFGVQLTSAV
SNLTITVKNASGAVVNTINAGAQAAGTVPFNWTPTDAAGNTLPDGTYSISASYTDTSGKQYAPTTLSSAQVLSVIKQADG
TPGLVLSNGATVGFSQVASIFPNTTKSASTGSASSSTN
>Mature_277_residues
TSSFTTIGGSGTTVNSLPYDTMSSNGQSSSPSGTSNTPGGTAGASGASSGINVASSLSTTSAADLQTTFLKLLVTQLQNQ
DPTSPVDSSQMTSQLAQINTVSGIAQLNTALTSLSSQLTAGQQTQAAMLIGSNVLAPGNTVPVKGGAASPFGVQLTSAVS
NLTITVKNASGAVVNTINAGAQAAGTVPFNWTPTDAAGNTLPDGTYSISASYTDTSGKQYAPTTLSSAQVLSVIKQADGT
PGLVLSNGATVGFSQVASIFPNTTKSASTGSASSSTN

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=181, Percent_Identity=45.3038674033149, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 27304; Mature: 27173

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSFTTIGGSGTTVNSLPYDTMSSNGQSSSPSGTSNTPGGTAGASGASSGINVASSLST
CCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
TSAADLQTTFLKLLVTQLQNQDPTSPVDSSQMTSQLAQINTVSGIAQLNTALTSLSSQLT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQQTQAAMLIGSNVLAPGNTVPVKGGAASPFGVQLTSAVSNLTITVKNASGAVVNTINA
CCCCHHEEEEECCCEECCCCEEEECCCCCCCCCEEHHHHHCEEEEEEECCCCCEEEEECC
GAQAAGTVPFNWTPTDAAGNTLPDGTYSISASYTDTSGKQYAPTTLSSAQVLSVIKQADG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCHHHHHHHHHHCCC
TPGLVLSNGATVGFSQVASIFPNTTKSASTGSASSSTN
CCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSSFTTIGGSGTTVNSLPYDTMSSNGQSSSPSGTSNTPGGTAGASGASSGINVASSLST
CCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
TSAADLQTTFLKLLVTQLQNQDPTSPVDSSQMTSQLAQINTVSGIAQLNTALTSLSSQLT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQQTQAAMLIGSNVLAPGNTVPVKGGAASPFGVQLTSAVSNLTITVKNASGAVVNTINA
CCCCHHEEEEECCCEECCCCEEEECCCCCCCCCEEHHHHHCEEEEEEECCCCCEEEEECC
GAQAAGTVPFNWTPTDAAGNTLPDGTYSISASYTDTSGKQYAPTTLSSAQVLSVIKQADG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCHHHHHHHHHHCCC
TPGLVLSNGATVGFSQVASIFPNTTKSASTGSASSSTN
CCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]