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The map label for this gene is flgF [H]

Identifier: 83720527

GI number: 83720527

Start: 277164

End: 277925

Strand: Direct

Name: flgF [H]

Synonym: BTH_I0244

Alternate gene names: 83720527

Gene position: 277164-277925 (Clockwise)

Preceding gene: 83719411

Following gene: 83721615

Centisome position: 7.28

GC content: 68.24

Gene sequence:

>762_bases
ATGGACCGACTGATCTATACGGCGATGACGGGCGCGACGCAGTCGCTCGAGCAGCAGTCCGTCGTCGCGAACAATCTCGC
GAACGCGTCGACGACGGGGTTCCGCGCGCAGCTCGCGACGTTCCGCGCGGTGCCGATGAACTTCGAGGACGGCAGCGGCA
ACGTCGATCCGGCGACGACGCGCACCTATACGCTGTCGTCGACGCCCGGCGCGGATTTCGCGCCGGGGCCGATCGAGCGC
ACGGGCAACCCGCTCGACGTCGCGATTCAGGGGCCGGGCTGGCTGTCGGTGATGCTGCCGGACGGCTCCGAGGCGTACAC
GCGCGCGGGCAACCTGCACGTCGACCAGAACGGGCAGCTCGTGACCGCGAACAACCTGCCCGTCGTCGGCAACGGCGGCC
CGCTCGCCGTGCCGCCGAACGCGCAGCTCACGATCGGCGCGGACGGCACCGTCTCGGCGCTGATGCCGGGCGATCCGCCG
ACCGCCGTCGCGATGATCGATCAACTGAAGCTCGTGAACCCCGATCCCGCGACGATGAAGCGCGGCGACGACGGCCTGTT
CCGCACCGCGGACGGCAATCCTGCCGACGCCGATCCGGCCGTGAAGGTCGTGCCGAATTCGCTTGAAGGCAGCAACGTCA
ATCCGGTGGCGGCGATGGTGTCGATGATCGACAACGCGCGCGCGTTCGAATTGCAGACGAAGCTGATCCAGTCCGCCGAC
CAGAACGAGCAGGCGGCGAACCAACTGCTCAACTTCAGCTAG

Upstream 100 bases:

>100_bases
AGCGCAACTACCAGGCGAACGCGCAGACGATCAAGACGCAGCAGACCGTCGACCAGACGCTCATCAACCTGTAAGCGGCC
TTCGCGGACAACAGCCAGCC

Downstream 100 bases:

>100_bases
GCGCAGCCAAGCGCCAGACAAGGAGTCAACACGTGAACCGTTCCCTCTACATCGCCGCAACCGGCATGAATGCGCAGCAG
GCGCAGATGGACGTGATCTC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATTRTYTLSSTPGADFAPGPIER
TGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQLVTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPP
TAVAMIDQLKLVNPDPATMKRGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD
QNEQAANQLLNFS

Sequences:

>Translated_253_residues
MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATTRTYTLSSTPGADFAPGPIER
TGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQLVTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPP
TAVAMIDQLKLVNPDPATMKRGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD
QNEQAANQLLNFS
>Mature_253_residues
MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATTRTYTLSSTPGADFAPGPIER
TGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQLVTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPP
TAVAMIDQLKLVNPDPATMKRGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD
QNEQAANQLLNFS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=259, Percent_Identity=53.2818532818533, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1787318, Length=270, Percent_Identity=34.0740740740741, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26272; Mature: 26272

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCCE
RTYTLSSTPGADFAPGPIERTGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQL
EEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCEEEEEECCCCHHHHCCCCEEECCCCCE
VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK
EEECCCEEEECCCCEEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHEECCCCHHHHC
RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD
CCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC
QNEQAANQLLNFS
CCHHHHHHHHCCC
>Mature Secondary Structure
MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCCE
RTYTLSSTPGADFAPGPIERTGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQL
EEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCEEEEEECCCCHHHHCCCCEEECCCCCE
VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK
EEECCCEEEECCCCEEECCCCEEEECCCCCEEEECCCCCCHHHHHHHHHEECCCCHHHHC
RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD
CCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC
QNEQAANQLLNFS
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]