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The map label for this gene is gerKA [H]

Identifier: 83590872

GI number: 83590872

Start: 2131302

End: 2132984

Strand: Reverse

Name: gerKA [H]

Synonym: Moth_2042

Alternate gene names: 83590872

Gene position: 2132984-2131302 (Counterclockwise)

Preceding gene: 83590873

Following gene: 83590871

Centisome position: 81.14

GC content: 59.12

Gene sequence:

>1683_bases
TTGCCCGGTCCTTACCGTAGACCCCTGCGGGCGGCCCTTTTCCGCCGCCGGCAAAAGCCGACCCAACAGGGCAAGCAAGA
TAACAATAAAGATAAACAGGGCCAGCCTGGCAGCGGGAATAAACACACGGCGCCTTACCCGCCCCTGGAAGAGTACCGGC
TTACGGCCGAGCTCAAGCTCAACCTGGAGCAGCTACAAAATATATTCGCCAAGTGCAGCGATGTGGTCCGTCGCGATTTT
TACCTGGGCCAGGCCGTCAAGGTAGCCCTTTTTTATATCGACGGCCTGGCTGATAAAAAGCTGATCGAGGACACTCTGGT
GCGGACTCTGCAGCAGGCACCTGCGGAACTGGCCCGCTCCCTGGCGGAAAGAACCCGGGACCTGACGGCGGTTATGGAGA
TGGTCATGCCTATGACGGACGTGGCCGTGGTTGACAACATGGGGAGTTTGGTTAAGCACGTCCTCAACGGTGATACAGTC
TTGATCCTAGACGGGTTTAACAAGGGCCTGGCCTTGAGCACCAGGGCCTGGGAGCACCGTGCCGTCGAAGAACCCATTAC
CGAAAGCGTAGTTCGTGGCCCCAGGGAGAGTTTTATCGAGAGCCTGCGCACCAACACCTCCCTTATCCGCCGGCGCCTGA
AAACCCCGTCCCTGAAGATGGAGACTGTCTGCCTGGGTCGCTACACCATGACCAACATTGTCATTACTTACATAGAGGAC
CTGGCTGACCCGGCGGTGGTGCGGGAGGTGCGCCGGCGCCTGGAGCGCATTCAAATTGACGGCGTCCTGGAGAGCGCCTA
TATTGAGGAACTGATCGAAGACAACCCGGATTCCCCTTTTCCCCAGATCGACCACACGGAGCGACCGGACAAAGTGGCTG
CCGCCCTGTTGGAGGGGCGGGTGGGCATCCTTATTGACGGCACGCCCTTCGCCCTCATTGTGCCCACCGTTTTTGTCCAG
TTCCTTCAGGCCAGCGAGGATTACTATGAACGCTATTATCTTTCCAGTTTCTTACGTTTAGCCCGATTCGTAGCCCTGAA
TATCGCCCTCTTACTGCCGGCTGTGTACGTGGCCGTCACTACCTTTCACCAGGAGATGCTGCCTACTAACCTGCTGGTGA
AGGTGGCTTCCCAGCGAGAAGGGATTCCCTTCCCTGCCTTGGTGGAGGCCCTGTTGATAGAGCTGACCTTTGAACTCCTG
CGGGAGGCCGGCGTGCGCCTGCCGCGTCCGGTGGGCCAGGCGGTGAGCATTGTCGGCGCCTTGGTCATCGGCGAGGCGGC
AGTCAGCGCTAGCCTGGTTTCCCCGGCCATGGTCATTGTCGTGGCTATGACGGGGATCAGCTCCTTTGCCACACCCTCTT
ACTCCATGGCCATTACTTTGCGCCTGCTCCGTTTCATCATGCTTATCCTGGCGGGAACCCTTGGCTTTTACGGTATCATG
CTCGGCCTGCTGGCCATCCTTGTACACCTCAATACCTTGCGCTCCTTCGGCGTACCCTACCTGGCGCCGGTGGCACCCTG
GAATTTTAGTGACTTTAAAGATGTCGTGGTCCGGGTGCCCCGCTGGGCCATGAACTCCCGGCCCAGCCAAATCGGCTACC
GCGACCCCGTCCGCCAGGGGGCAGGTCTGAAGCCTACGCCGCCGGCCAGTTCTAATCCTGCGCCTGAAAGGGGCGAGTCT
TAA

Upstream 100 bases:

>100_bases
CCGGGCGCATAATTTCTCCTCTCCCGGCCAAGGATAACTTATATGAAAAGAACTGACTTCGGGTTTACTACTGTTATCCC
GCGTACAGGAGGGAGAAACT

Downstream 100 bases:

>100_bases
TTGCGGGAAGAGGGTTATATCAGCCCCCGCCAGGCAAGCGTTCTGCTATGGTTTGCCATCCTGCCCACGGCCATCCTCTT
TTTGCCGGCCCTTCTGGCTT

Product: GerA spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MPGPYRRPLRAALFRRRQKPTQQGKQDNNKDKQGQPGSGNKHTAPYPPLEEYRLTAELKLNLEQLQNIFAKCSDVVRRDF
YLGQAVKVALFYIDGLADKKLIEDTLVRTLQQAPAELARSLAERTRDLTAVMEMVMPMTDVAVVDNMGSLVKHVLNGDTV
LILDGFNKGLALSTRAWEHRAVEEPITESVVRGPRESFIESLRTNTSLIRRRLKTPSLKMETVCLGRYTMTNIVITYIED
LADPAVVREVRRRLERIQIDGVLESAYIEELIEDNPDSPFPQIDHTERPDKVAAALLEGRVGILIDGTPFALIVPTVFVQ
FLQASEDYYERYYLSSFLRLARFVALNIALLLPAVYVAVTTFHQEMLPTNLLVKVASQREGIPFPALVEALLIELTFELL
REAGVRLPRPVGQAVSIVGALVIGEAAVSASLVSPAMVIVVAMTGISSFATPSYSMAITLRLLRFIMLILAGTLGFYGIM
LGLLAILVHLNTLRSFGVPYLAPVAPWNFSDFKDVVVRVPRWAMNSRPSQIGYRDPVRQGAGLKPTPPASSNPAPERGES

Sequences:

>Translated_560_residues
MPGPYRRPLRAALFRRRQKPTQQGKQDNNKDKQGQPGSGNKHTAPYPPLEEYRLTAELKLNLEQLQNIFAKCSDVVRRDF
YLGQAVKVALFYIDGLADKKLIEDTLVRTLQQAPAELARSLAERTRDLTAVMEMVMPMTDVAVVDNMGSLVKHVLNGDTV
LILDGFNKGLALSTRAWEHRAVEEPITESVVRGPRESFIESLRTNTSLIRRRLKTPSLKMETVCLGRYTMTNIVITYIED
LADPAVVREVRRRLERIQIDGVLESAYIEELIEDNPDSPFPQIDHTERPDKVAAALLEGRVGILIDGTPFALIVPTVFVQ
FLQASEDYYERYYLSSFLRLARFVALNIALLLPAVYVAVTTFHQEMLPTNLLVKVASQREGIPFPALVEALLIELTFELL
REAGVRLPRPVGQAVSIVGALVIGEAAVSASLVSPAMVIVVAMTGISSFATPSYSMAITLRLLRFIMLILAGTLGFYGIM
LGLLAILVHLNTLRSFGVPYLAPVAPWNFSDFKDVVVRVPRWAMNSRPSQIGYRDPVRQGAGLKPTPPASSNPAPERGES
>Mature_559_residues
PGPYRRPLRAALFRRRQKPTQQGKQDNNKDKQGQPGSGNKHTAPYPPLEEYRLTAELKLNLEQLQNIFAKCSDVVRRDFY
LGQAVKVALFYIDGLADKKLIEDTLVRTLQQAPAELARSLAERTRDLTAVMEMVMPMTDVAVVDNMGSLVKHVLNGDTVL
ILDGFNKGLALSTRAWEHRAVEEPITESVVRGPRESFIESLRTNTSLIRRRLKTPSLKMETVCLGRYTMTNIVITYIEDL
ADPAVVREVRRRLERIQIDGVLESAYIEELIEDNPDSPFPQIDHTERPDKVAAALLEGRVGILIDGTPFALIVPTVFVQF
LQASEDYYERYYLSSFLRLARFVALNIALLLPAVYVAVTTFHQEMLPTNLLVKVASQREGIPFPALVEALLIELTFELLR
EAGVRLPRPVGQAVSIVGALVIGEAAVSASLVSPAMVIVVAMTGISSFATPSYSMAITLRLLRFIMLILAGTLGFYGIML
GLLAILVHLNTLRSFGVPYLAPVAPWNFSDFKDVVVRVPRWAMNSRPSQIGYRDPVRQGAGLKPTPPASSNPAPERGES

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 62214; Mature: 62083

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGPYRRPLRAALFRRRQKPTQQGKQDNNKDKQGQPGSGNKHTAPYPPLEEYRLTAELKL
CCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHC
NLEQLQNIFAKCSDVVRRDFYLGQAVKVALFYIDGLADKKLIEDTLVRTLQQAPAELARS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAERTRDLTAVMEMVMPMTDVAVVDNMGSLVKHVLNGDTVLILDGFNKGLALSTRAWEHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECHHHHHHH
AVEEPITESVVRGPRESFIESLRTNTSLIRRRLKTPSLKMETVCLGRYTMTNIVITYIED
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHHHH
LADPAVVREVRRRLERIQIDGVLESAYIEELIEDNPDSPFPQIDHTERPDKVAAALLEGR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
VGILIDGTPFALIVPTVFVQFLQASEDYYERYYLSSFLRLARFVALNIALLLPAVYVAVT
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFHQEMLPTNLLVKVASQREGIPFPALVEALLIELTFELLREAGVRLPRPVGQAVSIVGA
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LVIGEAAVSASLVSPAMVIVVAMTGISSFATPSYSMAITLRLLRFIMLILAGTLGFYGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLAILVHLNTLRSFGVPYLAPVAPWNFSDFKDVVVRVPRWAMNSRPSQIGYRDPVRQG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCHHHCC
AGLKPTPPASSNPAPERGES
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGPYRRPLRAALFRRRQKPTQQGKQDNNKDKQGQPGSGNKHTAPYPPLEEYRLTAELKL
CCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHC
NLEQLQNIFAKCSDVVRRDFYLGQAVKVALFYIDGLADKKLIEDTLVRTLQQAPAELARS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LAERTRDLTAVMEMVMPMTDVAVVDNMGSLVKHVLNGDTVLILDGFNKGLALSTRAWEHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECHHHHHHH
AVEEPITESVVRGPRESFIESLRTNTSLIRRRLKTPSLKMETVCLGRYTMTNIVITYIED
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHCHHHHHHHHHHHHHH
LADPAVVREVRRRLERIQIDGVLESAYIEELIEDNPDSPFPQIDHTERPDKVAAALLEGR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
VGILIDGTPFALIVPTVFVQFLQASEDYYERYYLSSFLRLARFVALNIALLLPAVYVAVT
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFHQEMLPTNLLVKVASQREGIPFPALVEALLIELTFELLREAGVRLPRPVGQAVSIVGA
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LVIGEAAVSASLVSPAMVIVVAMTGISSFATPSYSMAITLRLLRFIMLILAGTLGFYGIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLAILVHLNTLRSFGVPYLAPVAPWNFSDFKDVVVRVPRWAMNSRPSQIGYRDPVRQG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCHHHCC
AGLKPTPPASSNPAPERGES
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]