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The map label for this gene is yndE [H]

Identifier: 83590871

GI number: 83590871

Start: 2130204

End: 2131301

Strand: Reverse

Name: yndE [H]

Synonym: Moth_2041

Alternate gene names: 83590871

Gene position: 2131301-2130204 (Counterclockwise)

Preceding gene: 83590872

Following gene: 83590870

Centisome position: 81.08

GC content: 54.55

Gene sequence:

>1098_bases
TTGCGGGAAGAGGGTTATATCAGCCCCCGCCAGGCAAGCGTTCTGCTATGGTTTGCCATCCTGCCCACGGCCATCCTCTT
TTTGCCGGCCCTTCTGGCTTTACGTGCCCGTCAGGACGCCTGGTTGGCGGTTATCCTGGCTACAATGGCCGCCGGAGTGC
CGGCACTGGGTATTTACCTGCTGGCCCAGCGCTTTCCCCATTATACCCTGTTTCAATACTGCGAGTTGATTTTAGGACGC
TTGGCCGGCAAAATGGTGGCCATGGTGTTTGTCCTGGGTTTTTTCTTACTCAACGCCGTGGTCATCCGGGAGTTCAGCGA
GTTTCTAACGACCGCGGTAATGCCGGAGACGCCGTGTTTATTCTTTGCCTTCAGTATTGTCGCCGTGGCTATTTATGCCG
CCCGCAACGGCCTGGAGGTTATCGCCCGCTGCACAGATTTTATCATGCCCCTGCTGGTCGCTTTTATTTTTGTGATCCTT
CTCTTTTCGACTCCGGAAATGTCTTTAAGGAATATCTTTCCTTTTCTAGAAAACGGCATCCGGCCGGTCCTGGGAGGAAC
CCTAATCACCTGGCCCTTCCTGGGCCAGGTGATTATCCTGGCCACTTATGGTGCCTTCGTCAACCCACCCCGGTCCCTGG
GGTGGAGCCTCATTAGCGGTCTGGTGGGGATCGCCTTTTTCCTCGGTCTAGTTACTATGGGCGTAATCCTCGTCTTTGGT
GCCTGCGAAGCCAGCAGCCTGACCTTTGCCGGTTATAACCTGGCCAGGGTTGTCTCCCTGGGCCAGTTTTTGGAGAGGAT
AGAGGTCCTTTTCCTGGCTATCTGGGTCGCCGGTGTCTTTATTAAAATAACCTTGAACTTCTATGTGGTCGCCCTGGGCC
TGGCTACTGTTACCGGTCTGAAAGAGTACCGGCCCCTGGTGGCGCCCCTAGGGGCCTTAAATACGGCTCTAGCAGCATTT
ATGTATAGAAACATCAGCGAGATCCGGCAGGATTTATTGATGGTAGAACCTGGTTGGACCTTGACCTGGCAATTTATTCT
ACCCCTGCTGTTGCTGCTGGTAGCCTGGGTGCGAGGGCAAAGGAGGACTGGCGCTTGA

Upstream 100 bases:

>100_bases
CAGCCAAATCGGCTACCGCGACCCCGTCCGCCAGGGGGCAGGTCTGAAGCCTACGCCGCCGGCCAGTTCTAATCCTGCGC
CTGAAAGGGGCGAGTCTTAA

Downstream 100 bases:

>100_bases
TGATCTGGTGCCGGCGGGTACTGGCTGCTGTCTTGCTGATCCTGGGCCTGCCCACCCTATCTGGTTGTTGGAGCCGGCAT
GAGATTGAGGAACTGGCTAT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MREEGYISPRQASVLLWFAILPTAILFLPALLALRARQDAWLAVILATMAAGVPALGIYLLAQRFPHYTLFQYCELILGR
LAGKMVAMVFVLGFFLLNAVVIREFSEFLTTAVMPETPCLFFAFSIVAVAIYAARNGLEVIARCTDFIMPLLVAFIFVIL
LFSTPEMSLRNIFPFLENGIRPVLGGTLITWPFLGQVIILATYGAFVNPPRSLGWSLISGLVGIAFFLGLVTMGVILVFG
ACEASSLTFAGYNLARVVSLGQFLERIEVLFLAIWVAGVFIKITLNFYVVALGLATVTGLKEYRPLVAPLGALNTALAAF
MYRNISEIRQDLLMVEPGWTLTWQFILPLLLLLVAWVRGQRRTGA

Sequences:

>Translated_365_residues
MREEGYISPRQASVLLWFAILPTAILFLPALLALRARQDAWLAVILATMAAGVPALGIYLLAQRFPHYTLFQYCELILGR
LAGKMVAMVFVLGFFLLNAVVIREFSEFLTTAVMPETPCLFFAFSIVAVAIYAARNGLEVIARCTDFIMPLLVAFIFVIL
LFSTPEMSLRNIFPFLENGIRPVLGGTLITWPFLGQVIILATYGAFVNPPRSLGWSLISGLVGIAFFLGLVTMGVILVFG
ACEASSLTFAGYNLARVVSLGQFLERIEVLFLAIWVAGVFIKITLNFYVVALGLATVTGLKEYRPLVAPLGALNTALAAF
MYRNISEIRQDLLMVEPGWTLTWQFILPLLLLLVAWVRGQRRTGA
>Mature_365_residues
MREEGYISPRQASVLLWFAILPTAILFLPALLALRARQDAWLAVILATMAAGVPALGIYLLAQRFPHYTLFQYCELILGR
LAGKMVAMVFVLGFFLLNAVVIREFSEFLTTAVMPETPCLFFAFSIVAVAIYAARNGLEVIARCTDFIMPLLVAFIFVIL
LFSTPEMSLRNIFPFLENGIRPVLGGTLITWPFLGQVIILATYGAFVNPPRSLGWSLISGLVGIAFFLGLVTMGVILVFG
ACEASSLTFAGYNLARVVSLGQFLERIEVLFLAIWVAGVFIKITLNFYVVALGLATVTGLKEYRPLVAPLGALNTALAAF
MYRNISEIRQDLLMVEPGWTLTWQFILPLLLLLVAWVRGQRRTGA

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40271; Mature: 40271

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREEGYISPRQASVLLWFAILPTAILFLPALLALRARQDAWLAVILATMAAGVPALGIYL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
LAQRFPHYTLFQYCELILGRLAGKMVAMVFVLGFFLLNAVVIREFSEFLTTAVMPETPCL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FFAFSIVAVAIYAARNGLEVIARCTDFIMPLLVAFIFVILLFSTPEMSLRNIFPFLENGI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RPVLGGTLITWPFLGQVIILATYGAFVNPPRSLGWSLISGLVGIAFFLGLVTMGVILVFG
CHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACEASSLTFAGYNLARVVSLGQFLERIEVLFLAIWVAGVFIKITLNFYVVALGLATVTGL
CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEYRPLVAPLGALNTALAAFMYRNISEIRQDLLMVEPGWTLTWQFILPLLLLLVAWVRGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCC
RRTGA
CCCCC
>Mature Secondary Structure
MREEGYISPRQASVLLWFAILPTAILFLPALLALRARQDAWLAVILATMAAGVPALGIYL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
LAQRFPHYTLFQYCELILGRLAGKMVAMVFVLGFFLLNAVVIREFSEFLTTAVMPETPCL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FFAFSIVAVAIYAARNGLEVIARCTDFIMPLLVAFIFVILLFSTPEMSLRNIFPFLENGI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RPVLGGTLITWPFLGQVIILATYGAFVNPPRSLGWSLISGLVGIAFFLGLVTMGVILVFG
CHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACEASSLTFAGYNLARVVSLGQFLERIEVLFLAIWVAGVFIKITLNFYVVALGLATVTGL
CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEYRPLVAPLGALNTALAAFMYRNISEIRQDLLMVEPGWTLTWQFILPLLLLLVAWVRGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCC
RRTGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]