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The map label for this gene is hmeB [H]

Identifier: 83590740

GI number: 83590740

Start: 1970942

End: 1972183

Strand: Reverse

Name: hmeB [H]

Synonym: Moth_1906

Alternate gene names: 83590740

Gene position: 1972183-1970942 (Counterclockwise)

Preceding gene: 83590741

Following gene: 83590738

Centisome position: 75.02

GC content: 54.99

Gene sequence:

>1242_bases
ATGGCTTTTGTCCCGGGCCTGATTCTTTTGCTGGTAAGTTTATTTACCTGGGGCTACCAGCTTAAAAACGGCCTGATTGT
GACCGGTATGCGCAATCCCTTTAGCTGGGGACTGTATATTGCCACCTTCGCCTTTTTTGTGGGGATTGCCGCCGGGGGGC
TAATCGTTTCTTCTTCGGTTTACCTTTTCAATCTTGAGCAGTTGAAGCCCTTTACCCGCATTGCTTCCCTGTCCGCCTTT
GCCAGCATTATGGCTGCGGCGGCAGTCATCCTGCCGGACCTGGGGCGGGTAGACAGGATTTACAACTTGCTGCTGCACCC
CAATTTCCGGTCGCCTTTAATCTGGGACGTAATAGTTGTTTCCGCCTACACCGTTTTAACTTTCTTGAGCGTTTATTTTC
AGCTTTTACCGGACTGGAAAAAGGAAGGATGCGGTTTTCTCAACGGCTGGACAAGGAAGCTTTCCCAGGAGGAGGTAGAA
AGCATTGCTGCCAGGTGGTCCCGGCGGGTAGCCATAGTGGGGCTCCCGGTGGCGATTCTAATTCACACCATCACGGCCTT
GATTTTTGCCACCCAGGCTTCGCGCGGCTGGTGGTATACGGCGATTTTACCCCCGGATTTCATCGCCGTGGCGGTGGCTT
CCGGGACGGCCCTGGTGCTGGTGATTGCCATCCTGGTGGTCGGGAAAGAGGGGTTTAACCAGTATACAGGCGCCTTTAAT
ACCCTGGCCCGGATTATCGCCGGCGCCCTGGCCGTCCACTTCTTTTTCGTAGCCATGGATCTCCTCATCCACTGGTGGTG
GGGCAGCCCCGAAGCCTTAAGCACCCTGGGCCTGGTTTTCAAGCGTTATGGCCCGGTCTACCTGGTGGAAATCGCCCTGC
CGGCCCTGGTCATGGTTTACTTCTTCAGCGAAAAAGGCGGTCGGTCGGCCGGTTCCCTCTTGCTGGGATGCGCCCTGCTT
TTTACCGGCGTATTTGCCCACCGGCTGATGTTAATGTTCCCGGCTTTTAACCAGTTTCCCTTAAGCCTTTCCCTTCCCGG
CATGGAGGTCGAAGGCTGGCATTACCCCATAGCTGTAGGCGTATTTAAAGCAGGAGCGCCGGTATTTGCCGGCTCCTGGC
CCTACGTGCCCACTATCTTTGAATTGGCCGTCGACCTTTTGCCCTTTGGCCTGGCCCTGCTGGTCATTTCCTTGATGGTA
AGTTCTTACAGTTTCCTGCCCCAGGAACAATCCCATCGTTAA

Upstream 100 bases:

>100_bases
GCGGTTGAAGGAAGAGCTGGGAACAAAGCCCAAGGTATATTACCTGCCACCGACAAGACCGCGGAAGTAAAAGGAGGGAG
ACCTTGTGAGGAAACTAAAT

Downstream 100 bases:

>100_bases
TAACCATGGCGCATAACGCAGGTTTTGCCCGAAAAAGAGGGAAGTAAATAGCAAAAAGTGTTTAGCCGGGACGATGGTCC
CGGCTGTATTATAATAACCC

Product: polysulphide reductase, NrfD

Products: NA

Alternate protein names: Hme subunit B [H]

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAFVPGLILLLVSLFTWGYQLKNGLIVTGMRNPFSWGLYIATFAFFVGIAAGGLIVSSSVYLFNLEQLKPFTRIASLSAF
ASIMAAAAVILPDLGRVDRIYNLLLHPNFRSPLIWDVIVVSAYTVLTFLSVYFQLLPDWKKEGCGFLNGWTRKLSQEEVE
SIAARWSRRVAIVGLPVAILIHTITALIFATQASRGWWYTAILPPDFIAVAVASGTALVLVIAILVVGKEGFNQYTGAFN
TLARIIAGALAVHFFFVAMDLLIHWWWGSPEALSTLGLVFKRYGPVYLVEIALPALVMVYFFSEKGGRSAGSLLLGCALL
FTGVFAHRLMLMFPAFNQFPLSLSLPGMEVEGWHYPIAVGVFKAGAPVFAGSWPYVPTIFELAVDLLPFGLALLVISLMV
SSYSFLPQEQSHR

Sequences:

>Translated_413_residues
MAFVPGLILLLVSLFTWGYQLKNGLIVTGMRNPFSWGLYIATFAFFVGIAAGGLIVSSSVYLFNLEQLKPFTRIASLSAF
ASIMAAAAVILPDLGRVDRIYNLLLHPNFRSPLIWDVIVVSAYTVLTFLSVYFQLLPDWKKEGCGFLNGWTRKLSQEEVE
SIAARWSRRVAIVGLPVAILIHTITALIFATQASRGWWYTAILPPDFIAVAVASGTALVLVIAILVVGKEGFNQYTGAFN
TLARIIAGALAVHFFFVAMDLLIHWWWGSPEALSTLGLVFKRYGPVYLVEIALPALVMVYFFSEKGGRSAGSLLLGCALL
FTGVFAHRLMLMFPAFNQFPLSLSLPGMEVEGWHYPIAVGVFKAGAPVFAGSWPYVPTIFELAVDLLPFGLALLVISLMV
SSYSFLPQEQSHR
>Mature_412_residues
AFVPGLILLLVSLFTWGYQLKNGLIVTGMRNPFSWGLYIATFAFFVGIAAGGLIVSSSVYLFNLEQLKPFTRIASLSAFA
SIMAAAAVILPDLGRVDRIYNLLLHPNFRSPLIWDVIVVSAYTVLTFLSVYFQLLPDWKKEGCGFLNGWTRKLSQEEVES
IAARWSRRVAIVGLPVAILIHTITALIFATQASRGWWYTAILPPDFIAVAVASGTALVLVIAILVVGKEGFNQYTGAFNT
LARIIAGALAVHFFFVAMDLLIHWWWGSPEALSTLGLVFKRYGPVYLVEIALPALVMVYFFSEKGGRSAGSLLLGCALLF
TGVFAHRLMLMFPAFNQFPLSLSLPGMEVEGWHYPIAVGVFKAGAPVFAGSWPYVPTIFELAVDLLPFGLALLVISLMVS
SYSFLPQEQSHR

Specific function: Has menaquinol-oxidizing activity. HmeB subunit may function as a menaquinol-oxidizing site. HmeA, hmeB and hmeE subunits may together catalyze electron transfer from menaquinol to cytochrome c [H]

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 45374; Mature: 45243

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVPGLILLLVSLFTWGYQLKNGLIVTGMRNPFSWGLYIATFAFFVGIAAGGLIVSSSV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCCE
YLFNLEQLKPFTRIASLSAFASIMAAAAVILPDLGRVDRIYNLLLHPNFRSPLIWDVIVV
EEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
SAYTVLTFLSVYFQLLPDWKKEGCGFLNGWTRKLSQEEVESIAARWSRRVAIVGLPVAIL
HHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEECCHHHHH
IHTITALIFATQASRGWWYTAILPPDFIAVAVASGTALVLVIAILVVGKEGFNQYTGAFN
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH
TLARIIAGALAVHFFFVAMDLLIHWWWGSPEALSTLGLVFKRYGPVYLVEIALPALVMVY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
FFSEKGGRSAGSLLLGCALLFTGVFAHRLMLMFPAFNQFPLSLSLPGMEVEGWHYPIAVG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEECCCCCHHEEE
VFKAGAPVFAGSWPYVPTIFELAVDLLPFGLALLVISLMVSSYSFLPQEQSHR
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AFVPGLILLLVSLFTWGYQLKNGLIVTGMRNPFSWGLYIATFAFFVGIAAGGLIVSSSV
CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCCE
YLFNLEQLKPFTRIASLSAFASIMAAAAVILPDLGRVDRIYNLLLHPNFRSPLIWDVIVV
EEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
SAYTVLTFLSVYFQLLPDWKKEGCGFLNGWTRKLSQEEVESIAARWSRRVAIVGLPVAIL
HHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCEEEECCHHHHH
IHTITALIFATQASRGWWYTAILPPDFIAVAVASGTALVLVIAILVVGKEGFNQYTGAFN
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH
TLARIIAGALAVHFFFVAMDLLIHWWWGSPEALSTLGLVFKRYGPVYLVEIALPALVMVY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
FFSEKGGRSAGSLLLGCALLFTGVFAHRLMLMFPAFNQFPLSLSLPGMEVEGWHYPIAVG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEECCCCCHHEEE
VFKAGAPVFAGSWPYVPTIFELAVDLLPFGLALLVISLMVSSYSFLPQEQSHR
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475; 11952791 [H]