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The map label for this gene is yccM [H]

Identifier: 83590738

GI number: 83590738

Start: 1968822

End: 1969508

Strand: Reverse

Name: yccM [H]

Synonym: Moth_1904

Alternate gene names: 83590738

Gene position: 1969508-1968822 (Counterclockwise)

Preceding gene: 83590740

Following gene: 83590737

Centisome position: 74.92

GC content: 55.17

Gene sequence:

>687_bases
ATGAAACGGAAGCATTCACTCCAGCACTGGCGCCTGGGGGTGCAAATCCTCGCGTTTCTGTTGTTCGTTTACCTGCTAAT
AAGCGGGAAAAACAAGCTCTGGATGCTGATCATGATGACTTTCCTGCTCATAACTCCGTTTTGGGGGCGCCTCTACTGCG
GCTGGCTCTGCCCCCTTAATACCCTTTTGCGCCCCGTCAACTGGCTGGTGAGTAAAAAGGCCCGGCGGTTGGCCAGAGAC
ATACCACCTGTAGGCAAGAGCCCGTGGTTGCGGGCTGTAATTTTTATCCTTTTCCTCCTTGTTTTCTTTATGACGCTGCG
GGGTATTATCAAAATAAACCTCATTGTGCTCCTTGCCCCCTTCGCCATTTTGACCACCCTCTTTTTCACCGGGGCTGCCT
GGCATCGTTACCTTTGTCCCTTTGGTGTACTCTTTAGCTTGCCAGCAGGCGTCAGCCGCTGGAGATTCCATATTAACCCG
GATCGCTGCCTGGCCTGCGGCCGCTGCCGGCGGGTATGCCCGGCGGGGGCCATCGCTACCAATGAAGCCCCGGGAAAAAG
CTACCGCATACTGCCCCGTTACTGCCTTTTTTGCTTCGCCTGCCTGGAGGTTTGCCCGCGCAGCAGCATTGAGCTAACTG
CTGCCAGGCCGGCTAGTTCCAGGGAGAATATGACGAGAAACCTTTGA

Upstream 100 bases:

>100_bases
TTAGCTAAAGGTATATAGGCTTGGGCGATTTATACCCTTGACAGGGAAGTTATTCCCAGCCATAATGTAAGTGAATATTT
ACTTATAGAGGAGGGCGGCG

Downstream 100 bases:

>100_bases
GGCTACCAGCAGGGGAGGTGACAGCATGACTGTGAAAGAGACCAGCGCCACCAGGCAACAACAAATAATAGCCGCCGCCA
TGGATATTATAGCTAAGCGC

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKRKHSLQHWRLGVQILAFLLFVYLLISGKNKLWMLIMMTFLLITPFWGRLYCGWLCPLNTLLRPVNWLVSKKARRLARD
IPPVGKSPWLRAVIFILFLLVFFMTLRGIIKINLIVLLAPFAILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINP
DRCLACGRCRRVCPAGAIATNEAPGKSYRILPRYCLFCFACLEVCPRSSIELTAARPASSRENMTRNL

Sequences:

>Translated_228_residues
MKRKHSLQHWRLGVQILAFLLFVYLLISGKNKLWMLIMMTFLLITPFWGRLYCGWLCPLNTLLRPVNWLVSKKARRLARD
IPPVGKSPWLRAVIFILFLLVFFMTLRGIIKINLIVLLAPFAILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINP
DRCLACGRCRRVCPAGAIATNEAPGKSYRILPRYCLFCFACLEVCPRSSIELTAARPASSRENMTRNL
>Mature_228_residues
MKRKHSLQHWRLGVQILAFLLFVYLLISGKNKLWMLIMMTFLLITPFWGRLYCGWLCPLNTLLRPVNWLVSKKARRLARD
IPPVGKSPWLRAVIFILFLLVFFMTLRGIIKINLIVLLAPFAILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINP
DRCLACGRCRRVCPAGAIATNEAPGKSYRILPRYCLFCFACLEVCPRSSIELTAARPASSRENMTRNL

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=256, Percent_Identity=23.4375, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26231; Mature: 26231

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKHSLQHWRLGVQILAFLLFVYLLISGKNKLWMLIMMTFLLITPFWGRLYCGWLCPLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TLLRPVNWLVSKKARRLARDIPPVGKSPWLRAVIFILFLLVFFMTLRGIIKINLIVLLAP
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINPDRCLACGRCRRVCPAGAIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEECCHHHHHHHHHHHHHCCCCCCCC
NEAPGKSYRILPRYCLFCFACLEVCPRSSIELTAARPASSRENMTRNL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCC
>Mature Secondary Structure
MKRKHSLQHWRLGVQILAFLLFVYLLISGKNKLWMLIMMTFLLITPFWGRLYCGWLCPLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TLLRPVNWLVSKKARRLARDIPPVGKSPWLRAVIFILFLLVFFMTLRGIIKINLIVLLAP
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINPDRCLACGRCRRVCPAGAIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEECCHHHHHHHHHHHHHCCCCCCCC
NEAPGKSYRILPRYCLFCFACLEVCPRSSIELTAARPASSRENMTRNL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]