Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 83590208

GI number: 83590208

Start: 1404641

End: 1405387

Strand: Reverse

Name: scpA [H]

Synonym: Moth_1361

Alternate gene names: 83590208

Gene position: 1405387-1404641 (Counterclockwise)

Preceding gene: 83590209

Following gene: 83590207

Centisome position: 53.46

GC content: 63.05

Gene sequence:

>747_bases
ATGCTAGGTAATGTAAGGCTGGATGTTTTTCAGGGCCCCCTGGATCTCCTCCTCACTCTCATTGAACGCCAGGAAATCGA
CGTTCAGGCTATCCCCGTCGCGGAAGTAACGGCCCAGTACCTGGAGTACCTGCAGGAAGTCGAGGAACTGGACCTGGAGT
GGGCTAGCGAGTTTCTGGTCCTGGGGGCGGAACTCCTGGCTCTGAAGGCCAGGCTCCTATTGCAGCGCCCGGCGGCCGGG
GAGCAGGAAGAAGAGGGGGAAGACCCGGCCCGGGCCCTGGCGGATCGATTGCAGGCTTACCGCTGTTATAAAGAGGCGGC
CCAACACCTGGCCGAACTGGCCGCTACCGGTGCCCTTATTTTTACCAGGCCCCGGGACCAGGAGGCTGTAGAGCGGGCCC
TGGCCGGCATCAACCCCCTGGCTGGCGTAACACCCCTGGATCTGGCGCGGGCTATGGCGCGCGTCCTGGCCCGTAAGGAG
CAGGTTCAGGAACCAGAGGAACCCCGGCTCATACCCCGGCTGGCCTTTACCCTGGCGGGCCAGGTACGCCATATCTTGCG
CAGCCTTTACCGGGCAAAAACCCTCAGCCTGGACAGACTCTTGAGTACCAGGCCCACCCGGATGGAGGTAGCCCTGACCT
TCCTGGCCCTGCTGGAACTGGCCCGGCGGGGCCGGGTAGCCCTGGCCCAGGAGGTTAATTTCGGCAATATCGAGGTGCGG
TTGTTACCGCATCCAGGAGCAAGGTGA

Upstream 100 bases:

>100_bases
AACCTAATTATTGCTGCCAGCGGCCTGGCCTTTATATGATAGAATTCACCCGGAAATTGTCCGGGGGTACAGGGGAAGCT
GACTTGCCGGGGTGGGGCGG

Downstream 100 bases:

>100_bases
TTATCCTTGCCTTTATTTTTCAGTGATAACCTGAGAGCTGCCCTGGAATGTTTGCTCTTTGTCGCCGGCGGTCCGGTGTC
GGTAGACTCCCTGGCGGCCT

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLGNVRLDVFQGPLDLLLTLIERQEIDVQAIPVAEVTAQYLEYLQEVEELDLEWASEFLVLGAELLALKARLLLQRPAAG
EQEEEGEDPARALADRLQAYRCYKEAAQHLAELAATGALIFTRPRDQEAVERALAGINPLAGVTPLDLARAMARVLARKE
QVQEPEEPRLIPRLAFTLAGQVRHILRSLYRAKTLSLDRLLSTRPTRMEVALTFLALLELARRGRVALAQEVNFGNIEVR
LLPHPGAR

Sequences:

>Translated_248_residues
MLGNVRLDVFQGPLDLLLTLIERQEIDVQAIPVAEVTAQYLEYLQEVEELDLEWASEFLVLGAELLALKARLLLQRPAAG
EQEEEGEDPARALADRLQAYRCYKEAAQHLAELAATGALIFTRPRDQEAVERALAGINPLAGVTPLDLARAMARVLARKE
QVQEPEEPRLIPRLAFTLAGQVRHILRSLYRAKTLSLDRLLSTRPTRMEVALTFLALLELARRGRVALAQEVNFGNIEVR
LLPHPGAR
>Mature_248_residues
MLGNVRLDVFQGPLDLLLTLIERQEIDVQAIPVAEVTAQYLEYLQEVEELDLEWASEFLVLGAELLALKARLLLQRPAAG
EQEEEGEDPARALADRLQAYRCYKEAAQHLAELAATGALIFTRPRDQEAVERALAGINPLAGVTPLDLARAMARVLARKE
QVQEPEEPRLIPRLAFTLAGQVRHILRSLYRAKTLSLDRLLSTRPTRMEVALTFLALLELARRGRVALAQEVNFGNIEVR
LLPHPGAR

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 27720; Mature: 27720

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNVRLDVFQGPLDLLLTLIERQEIDVQAIPVAEVTAQYLEYLQEVEELDLEWASEFLV
CCCCEEHHHHHCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAELLALKARLLLQRPAAGEQEEEGEDPARALADRLQAYRCYKEAAQHLAELAATGALI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FTRPRDQEAVERALAGINPLAGVTPLDLARAMARVLARKEQVQEPEEPRLIPRLAFTLAG
EECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QVRHILRSLYRAKTLSLDRLLSTRPTRMEVALTFLALLELARRGRVALAQEVNFGNIEVR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEE
LLPHPGAR
EECCCCCC
>Mature Secondary Structure
MLGNVRLDVFQGPLDLLLTLIERQEIDVQAIPVAEVTAQYLEYLQEVEELDLEWASEFLV
CCCCEEHHHHHCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAELLALKARLLLQRPAAGEQEEEGEDPARALADRLQAYRCYKEAAQHLAELAATGALI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FTRPRDQEAVERALAGINPLAGVTPLDLARAMARVLARKEQVQEPEEPRLIPRLAFTLAG
EECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QVRHILRSLYRAKTLSLDRLLSTRPTRMEVALTFLALLELARRGRVALAQEVNFGNIEVR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEE
LLPHPGAR
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA