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The map label for this gene is ywhC [H]

Identifier: 83590209

GI number: 83590209

Start: 1405449

End: 1406078

Strand: Reverse

Name: ywhC [H]

Synonym: Moth_1362

Alternate gene names: 83590209

Gene position: 1406078-1405449 (Counterclockwise)

Preceding gene: 83590210

Following gene: 83590208

Centisome position: 53.49

GC content: 56.03

Gene sequence:

>630_bases
ATGCACCTGCAGAGCTTGTCCCAGTTAATCCTGGGTATTCCAGCCATCCTGATGGCCCTGACCTTTCATGAGTATGCCCA
CGGGAAGGCAGCCTACTTTCTGGGAGATCCCACGGCCAGAAATCAGGGGCGGTTAACCTTAAATCCCCTGGCCCACCTGG
ATCCCCTGGGAACCCTGCTACTTATCGTAGCCGGATTTGGCTGGGCCAAGCCGGTACAGATAAATCCCTTTTACTTTCAA
ATAGACCGGCGTAAGGGCATGATGCTGGTGGGCCTGGCTGGACCCCTTATGAACCTGGTCCTGGCCTATCTGGCAGCCGT
GCTCCTGCATCTTTTTCTGCGGCTGGATCTGGGTGGCATCTGGATCCAGACCTTTTTAAACCTGCTGGTGGGCTACAACG
TTGTTCTGGCCGTCTTTAACCTGATTCCCGTACCGCCCCTGGATGGTTCCCGGGTCCTGGCCGGGATTCTCCCGCCCGAA
GGAGGAGCTGCTGTTTATCGCCTGGAGAGTTACGGCACCTTGATCTTACTCCTCCTCATTGCTACGGGAATCATCAGCCG
CATCCTGGGCCCCCTGGTCAACCTGGTCCTTAACCTAATTATTGCTGCCAGCGGCCTGGCCTTTATATGA

Upstream 100 bases:

>100_bases
GGGTCGCGCCCGGCCCCGGAGGCGCTGATCTTTGCCCTGGCCCAGGCCGGGTGGAGCCAGTTGCCGGGCTGGGCCCTACC
TGGTGGGAAAGGAGTCGGCC

Downstream 100 bases:

>100_bases
TAGAATTCACCCGGAAATTGTCCGGGGGTACAGGGGAAGCTGACTTGCCGGGGTGGGGCGGATGCTAGGTAATGTAAGGC
TGGATGTTTTTCAGGGCCCC

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MHLQSLSQLILGIPAILMALTFHEYAHGKAAYFLGDPTARNQGRLTLNPLAHLDPLGTLLLIVAGFGWAKPVQINPFYFQ
IDRRKGMMLVGLAGPLMNLVLAYLAAVLLHLFLRLDLGGIWIQTFLNLLVGYNVVLAVFNLIPVPPLDGSRVLAGILPPE
GGAAVYRLESYGTLILLLLIATGIISRILGPLVNLVLNLIIAASGLAFI

Sequences:

>Translated_209_residues
MHLQSLSQLILGIPAILMALTFHEYAHGKAAYFLGDPTARNQGRLTLNPLAHLDPLGTLLLIVAGFGWAKPVQINPFYFQ
IDRRKGMMLVGLAGPLMNLVLAYLAAVLLHLFLRLDLGGIWIQTFLNLLVGYNVVLAVFNLIPVPPLDGSRVLAGILPPE
GGAAVYRLESYGTLILLLLIATGIISRILGPLVNLVLNLIIAASGLAFI
>Mature_209_residues
MHLQSLSQLILGIPAILMALTFHEYAHGKAAYFLGDPTARNQGRLTLNPLAHLDPLGTLLLIVAGFGWAKPVQINPFYFQ
IDRRKGMMLVGLAGPLMNLVLAYLAAVLLHLFLRLDLGGIWIQTFLNLLVGYNVVLAVFNLIPVPPLDGSRVLAGILPPE
GGAAVYRLESYGTLILLLLIATGIISRILGPLVNLVLNLIIAASGLAFI

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22519; Mature: 22519

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLQSLSQLILGIPAILMALTFHEYAHGKAAYFLGDPTARNQGRLTLNPLAHLDPLGTLL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCHHHHCHHHHHH
LIVAGFGWAKPVQINPFYFQIDRRKGMMLVGLAGPLMNLVLAYLAAVLLHLFLRLDLGGI
HHHHCCCCCCCEEECCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
WIQTFLNLLVGYNVVLAVFNLIPVPPLDGSRVLAGILPPEGGAAVYRLESYGTLILLLLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHH
ATGIISRILGPLVNLVLNLIIAASGLAFI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHLQSLSQLILGIPAILMALTFHEYAHGKAAYFLGDPTARNQGRLTLNPLAHLDPLGTLL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCHHHHCHHHHHH
LIVAGFGWAKPVQINPFYFQIDRRKGMMLVGLAGPLMNLVLAYLAAVLLHLFLRLDLGGI
HHHHCCCCCCCEEECCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
WIQTFLNLLVGYNVVLAVFNLIPVPPLDGSRVLAGILPPEGGAAVYRLESYGTLILLLLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHH
ATGIISRILGPLVNLVLNLIIAASGLAFI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]