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The map label for this gene is scpB

Identifier: 83590207

GI number: 83590207

Start: 1404047

End: 1404634

Strand: Reverse

Name: scpB

Synonym: Moth_1360

Alternate gene names: 83590207

Gene position: 1404634-1404047 (Counterclockwise)

Preceding gene: 83590208

Following gene: 83590206

Centisome position: 53.43

GC content: 58.67

Gene sequence:

>588_bases
TTGCCTTTATTTTTCAGTGATAACCTGAGAGCTGCCCTGGAATGTTTGCTCTTTGTCGCCGGCGGTCCGGTGTCGGTAGA
CTCCCTGGCGGCCTGCCTGGGCGTTAAACCCGGAGATGTCGATGAGCTGGCGGCTGAATTACAGGAACTCTACGCCCGGG
AAGAACGGGGCCTGCAGATCCGGGCCGTAGCCGGTGGCTATCAGATGTGCACCCGGCCCGAGTTCGCCAGCTATTGTGAG
GCCCTTTTGCGCCCGGAACTGCCGGCCTTATCCCGGGCCGCCCTGGAGACCCTGGCCATTATCGCCTACCGCCAGCCGGT
AACCCGCACGGAAATGGAGTATATCCGGGGAGTCAAGGTCGATGGCGTTTTAAATACCCTCATTAGCCGGGGCCTGGTCC
AGGAGGTTGGCCGCAAGGAGGCCCCGGGACGCCCCATCCTTTATGGTACCACGCCCAAATTCCTGGAGTTTTTCGGTTTA
AAGGACTTAAAGGAATTGCCTCCCCTGGAGGATGTTGCCGCGAGTCAGGAAAATAGCCGTGAAGCAGGTGGTCGTGGTAG
TATACCGGGTCATCCTGGGGAAGAATAA

Upstream 100 bases:

>100_bases
GGAACTGGCCCGGCGGGGCCGGGTAGCCCTGGCCCAGGAGGTTAATTTCGGCAATATCGAGGTGCGGTTGTTACCGCATC
CAGGAGCAAGGTGATTATCC

Downstream 100 bases:

>100_bases
TTGCACACTTCTTCCCGGGGGTGGCGGGATGCTTTGGTCCTGGCTGGCAGGTTTACTGGTGGGTATGGTTGTTTTACTCC
TGGTCCCGGTACGCCTGGAG

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPLFFSDNLRAALECLLFVAGGPVSVDSLAACLGVKPGDVDELAAELQELYAREERGLQIRAVAGGYQMCTRPEFASYCE
ALLRPELPALSRAALETLAIIAYRQPVTRTEMEYIRGVKVDGVLNTLISRGLVQEVGRKEAPGRPILYGTTPKFLEFFGL
KDLKELPPLEDVAASQENSREAGGRGSIPGHPGEE

Sequences:

>Translated_195_residues
MPLFFSDNLRAALECLLFVAGGPVSVDSLAACLGVKPGDVDELAAELQELYAREERGLQIRAVAGGYQMCTRPEFASYCE
ALLRPELPALSRAALETLAIIAYRQPVTRTEMEYIRGVKVDGVLNTLISRGLVQEVGRKEAPGRPILYGTTPKFLEFFGL
KDLKELPPLEDVAASQENSREAGGRGSIPGHPGEE
>Mature_194_residues
PLFFSDNLRAALECLLFVAGGPVSVDSLAACLGVKPGDVDELAAELQELYAREERGLQIRAVAGGYQMCTRPEFASYCEA
LLRPELPALSRAALETLAIIAYRQPVTRTEMEYIRGVKVDGVLNTLISRGLVQEVGRKEAPGRPILYGTTPKFLEFFGLK
DLKELPPLEDVAASQENSREAGGRGSIPGHPGEE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPB_MOOTA (Q2RIR6)

Other databases:

- EMBL:   CP000232
- RefSeq:   YP_430216.1
- ProteinModelPortal:   Q2RIR6
- SMR:   Q2RIR6
- STRING:   Q2RIR6
- GeneID:   3832282
- GenomeReviews:   CP000232_GR
- KEGG:   mta:Moth_1360
- NMPDR:   fig|264732.9.peg.1356
- eggNOG:   COG1386
- HOGENOM:   HBG752450
- OMA:   NILEEMQ
- ProtClustDB:   CLSK943583
- BioCyc:   MTHE264732:MOTH_1360-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01804
- InterPro:   IPR005234
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PIRSF:   PIRSF019345
- TIGRFAMs:   TIGR00281

Pfam domain/function: PF04079 DUF387

EC number: NA

Molecular weight: Translated: 21162; Mature: 21030

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFFSDNLRAALECLLFVAGGPVSVDSLAACLGVKPGDVDELAAELQELYAREERGLQI
CCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEE
RAVAGGYQMCTRPEFASYCEALLRPELPALSRAALETLAIIAYRQPVTRTEMEYIRGVKV
EEECCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
DGVLNTLISRGLVQEVGRKEAPGRPILYGTTPKFLEFFGLKDLKELPPLEDVAASQENSR
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCHHHHHHCCCHHHHHHCCCCCC
EAGGRGSIPGHPGEE
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLFFSDNLRAALECLLFVAGGPVSVDSLAACLGVKPGDVDELAAELQELYAREERGLQI
CCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEE
RAVAGGYQMCTRPEFASYCEALLRPELPALSRAALETLAIIAYRQPVTRTEMEYIRGVKV
EEECCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
DGVLNTLISRGLVQEVGRKEAPGRPILYGTTPKFLEFFGLKDLKELPPLEDVAASQENSR
HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCHHHHHHCCCHHHHHHCCCCCC
EAGGRGSIPGHPGEE
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA