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The map label for this gene is dctP [H]

Identifier: 83595007

GI number: 83595007

Start: 4225525

End: 4226520

Strand: Reverse

Name: dctP [H]

Synonym: Rru_A3678

Alternate gene names: 83595007

Gene position: 4226520-4225525 (Counterclockwise)

Preceding gene: 83595008

Following gene: 83595006

Centisome position: 97.1

GC content: 60.44

Gene sequence:

>996_bases
ATGAAACTTTCCGTATTTATGGGACTGATTCTGGGGGGGGTGATGATCGCCGGGGGCGCTCAGGCCGCCGATGAACCGAT
CGTCATTAAATTCAGCCATGTCGTGGCGCCCGATACCCCCAAGGGCAAGGCCGCCGAGATGTTCAAGAAGCTGGCCGAGG
AAGGCACGGCCGGCCGCGTCAAGGTCGAGGTCTATCCCAACTCGCAGCTTTACAAGGACAAAGAGGAACTCGAAGCCCTC
CAGCTTGGCGCCGTGCAGATGCTGGCGCCGTCCCTGGCCAAATTCGGGCCGCTGGGCGTCAAGGAATTCGAGGTTTTCGA
CCTGCCCTACATCTTCCCGACCAAGGACGTGCTGCGCGCCGTCACCGACGGGCCGATCGGCGCCTCGCTGCTCAAGAAGC
TGGAAGGCCGCGGCATCAAAGGCTTGGCCTATTGGGATAACGGCTTCAAGATTTTCAGCGCCAACAAGCCGCTGCTCAAG
CCCGACGACCTCAAGGGCGTGAAGATGCGCATCCAGTCATCGAAGGTGCTCGATGCCGAAATGCGCGCGCTGGGCGCCCT
GCCGCAGGTGATGGCCTTCTCGGAAGTCTATCAGGCCCTGCAGACCGGCGTTGTCGACGGCACCGAAAACCCGCCGTCGA
ACATGTATACCCAGAAGATGCACGAAGTGCAGAAGCATGCCACGCTGACCAATCACGGCTATCTGGGCTATGCGGTCATC
GTGAACAAGAAGTTCTGGGAAGGCCTGCCCGCCGATATCCGCGCACCGCTGGAAACGGCGATGGCGGACTCCACCAAGTT
CGCCAATGCCATCGCCCAGCAGGAAAACGACGATTCGCTCGCGGCGATGAAGGCTTCGGGCAAGACCGAATTCCACATGC
CCTCCGAGGATGAACTGAAGGCCTGGCAAGACGCCCTGCTGCCCGTTCACAAGGAGATGGAAGGCCGCGTCGGCAAGGAT
CTGATCGAGTCGATTTACGCCGTTTCCAAGCAGTAG

Upstream 100 bases:

>100_bases
GCCCGCGATCATTGATTGCGGCATTCCATGGGGATGGGATGGGTTCTGGCTGTCAAGAATGATGTACTGGAAACTTAATT
TCAGTACCGGGAGGACACTT

Downstream 100 bases:

>100_bases
GTCGGTTTTCCCCAACCCGATCCGGTAATCCTTCCCGGGACGCGATTCCTCATCGTCGCTTCCCGGGGCCTTGCCCGCAG
GGCCGGCGCGTGGTTTCGCG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKLSVFMGLILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRVKVEVYPNSQLYKDKEELEAL
QLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRAVTDGPIGASLLKKLEGRGIKGLAYWDNGFKIFSANKPLLK
PDDLKGVKMRIQSSKVLDAEMRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVI
VNKKFWEGLPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELKAWQDALLPVHKEMEGRVGKD
LIESIYAVSKQ

Sequences:

>Translated_331_residues
MKLSVFMGLILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRVKVEVYPNSQLYKDKEELEAL
QLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRAVTDGPIGASLLKKLEGRGIKGLAYWDNGFKIFSANKPLLK
PDDLKGVKMRIQSSKVLDAEMRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVI
VNKKFWEGLPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELKAWQDALLPVHKEMEGRVGKD
LIESIYAVSKQ
>Mature_331_residues
MKLSVFMGLILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRVKVEVYPNSQLYKDKEELEAL
QLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRAVTDGPIGASLLKKLEGRGIKGLAYWDNGFKIFSANKPLLK
PDDLKGVKMRIQSSKVLDAEMRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVI
VNKKFWEGLPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELKAWQDALLPVHKEMEGRVGKD
LIESIYAVSKQ

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=308, Percent_Identity=28.5714285714286, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36126; Mature: 36126

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSVFMGLILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRV
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
KVEVYPNSQLYKDKEELEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRA
EEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHH
VTDGPIGASLLKKLEGRGIKGLAYWDNGFKIFSANKPLLKPDDLKGVKMRIQSSKVLDAE
HCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHEEECCCHHHHHH
MRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVI
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
VNKKFWEGLPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELK
EECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCHHHHH
AWQDALLPVHKEMEGRVGKDLIESIYAVSKQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSVFMGLILGGVMIAGGAQAADEPIVIKFSHVVAPDTPKGKAAEMFKKLAEEGTAGRV
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
KVEVYPNSQLYKDKEELEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRA
EEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHH
VTDGPIGASLLKKLEGRGIKGLAYWDNGFKIFSANKPLLKPDDLKGVKMRIQSSKVLDAE
HCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHEEECCCHHHHHH
MRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVI
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
VNKKFWEGLPADIRAPLETAMADSTKFANAIAQQENDDSLAAMKASGKTEFHMPSEDELK
EECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCHHHHH
AWQDALLPVHKEMEGRVGKDLIESIYAVSKQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]