Click here to switch to the map view.

The map label for this gene is 83595006

Identifier: 83595006

GI number: 83595006

Start: 4224670

End: 4225395

Strand: Reverse

Name: 83595006

Synonym: Rru_A3677

Alternate gene names: NA

Gene position: 4225395-4224670 (Counterclockwise)

Preceding gene: 83595007

Following gene: 83595005

Centisome position: 97.07

GC content: 64.6

Gene sequence:

>726_bases
GTGAAAGTCCTCGACCACCTCGAGGAGGCGCTCATCGCCTTCCTCATGGCCGCCGCGACGTTGATCATCTTCGTCGCCGT
GGTCCATCGCTACGCCTCCGGCGTGGCTTTCCTTTACCCCTACGTCGGCCATCTGCATTTCGCCTGGGCCCAGGAACTCT
GCATCATCTTGTTCGTCTGGATGGCGAAATTCGGCGCGGCCTATGGCGTGCGCACCGGCATCCACGTTGGCGTCGACGTC
GTCATCAACCGCCTGAAACCCCGGGCGCGCGGCGTGTTCATCGTTTTCGGCCTGTTGGCCGGGGCGGCGTTCACCGGCTG
CGTCGCCGTGCTGGGCGGCTCGTTCGTTTGGGATAACGGCGCCCATTACGCCTTCGTCACCGCCCTGGGGCTGGAGATCG
GCGACCTTTACGAAGGGCCGATCACCGCCGACCTCGAGTGGCCGACCTGGATCGTCTACAGCGCCATTCCGCTGGGATCG
TCCTTGATGTGCTTTCGCTTCCTGCAGGTCTGCGTCGGCTTCCTGCGCACGGGCGAGTTGCCCCACCACGACCATGGCCA
TGTGGAGGGCCTGGACGAGGACAAGACCGATGCCCAGCGCGCCGCCCAGGACATCAACTGGTTCACCATGAACGACGGCC
TCCATCCCAAGGACATCGCCCACGACGACGACACCGGGGACAAGCCAGATGATGGCACCGGAACCGGCAAGGGAGACGGC
CGATGA

Upstream 100 bases:

>100_bases
CCTTCCCGGGACGCGATTCCTCATCGTCGCTTCCCGGGGCCTTGCCCGCAGGGCCGGCGCGTGGTTTCGCGACCGGCCCG
TTCGTCGGTGGAGCCCGCCC

Downstream 100 bases:

>100_bases
GCGCCCTCATCATCTTCACCCTGCTGCTCTGCCTGATGCTGACGGGCATGCCGATCTCGATCTCGCTCGGCCTGACGGTT
CTGACCTTCCTGTTCACCAT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Subunit; Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport Protein DctQ; C4-Dicarboxylate Transporter; TRAP-Type C4-Dicarboxylate Transport System Small Permease; TRAP Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Transporter; TRAP-Type C4-Dicarboxylate Transport System; C4-Dicarboxylate Transport System Small Permease Component; TRAP Dicarboxylate Family Transporter DctQ Subunit; C4-Dicarboxylate Transport System; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKVLDHLEEALIAFLMAAATLIIFVAVVHRYASGVAFLYPYVGHLHFAWAQELCIILFVWMAKFGAAYGVRTGIHVGVDV
VINRLKPRARGVFIVFGLLAGAAFTGCVAVLGGSFVWDNGAHYAFVTALGLEIGDLYEGPITADLEWPTWIVYSAIPLGS
SLMCFRFLQVCVGFLRTGELPHHDHGHVEGLDEDKTDAQRAAQDINWFTMNDGLHPKDIAHDDDTGDKPDDGTGTGKGDG
R

Sequences:

>Translated_241_residues
MKVLDHLEEALIAFLMAAATLIIFVAVVHRYASGVAFLYPYVGHLHFAWAQELCIILFVWMAKFGAAYGVRTGIHVGVDV
VINRLKPRARGVFIVFGLLAGAAFTGCVAVLGGSFVWDNGAHYAFVTALGLEIGDLYEGPITADLEWPTWIVYSAIPLGS
SLMCFRFLQVCVGFLRTGELPHHDHGHVEGLDEDKTDAQRAAQDINWFTMNDGLHPKDIAHDDDTGDKPDDGTGTGKGDG
R
>Mature_241_residues
MKVLDHLEEALIAFLMAAATLIIFVAVVHRYASGVAFLYPYVGHLHFAWAQELCIILFVWMAKFGAAYGVRTGIHVGVDV
VINRLKPRARGVFIVFGLLAGAAFTGCVAVLGGSFVWDNGAHYAFVTALGLEIGDLYEGPITADLEWPTWIVYSAIPLGS
SLMCFRFLQVCVGFLRTGELPHHDHGHVEGLDEDKTDAQRAAQDINWFTMNDGLHPKDIAHDDDTGDKPDDGTGTGKGDG
R

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26243; Mature: 26243

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA