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The map label for this gene is 83594947

Identifier: 83594947

GI number: 83594947

Start: 4157083

End: 4157529

Strand: Direct

Name: 83594947

Synonym: Rru_A3618

Alternate gene names: NA

Gene position: 4157083-4157529 (Clockwise)

Preceding gene: 83594946

Following gene: 83594948

Centisome position: 95.5

GC content: 55.48

Gene sequence:

>447_bases
ATGCTCTCCTATGGAGTTGAGTACACCGACCCCTATGCCTGGGTGAAGACGCTGCATGTGATCGCCGTCATCACCTGGAT
GGCCGGGTTGTTTTATCTGCCGCGCCTGTTCGTCTATCACGCCATGGAAACCCCGGGCTCGGCCGCTTCGGAAAAATTCA
AGATCATGGAGCGCCGCTTGCTGCGCGCCATCATGAACCCGTCGATGATCATCGTTCTGGTGACCGGCCTGCTGATGATC
GAAGGCTGGCTGTCTAGCGGCTGGCTTCATGTGAAGCTGCTGATGGTCGCCGGTTTGATCACCATGCATATGTTTAATGC
CCGCTGGCGGCGCGACTTTGAAGCCGATCGTAACACCCGCAGCCATGTCTTCTACCGATACGCGAACGAGATTCCGACGG
TCATGATGCTGATCATCATCCCGATGGTGATTCTAAAGCCGTTTTAA

Upstream 100 bases:

>100_bases
CTGTCGTGGTGTCGCGGACACCTTGACGAGGGTTGGCGCCGCCAGAGGGGATCAACGGCTGGTGGATGCCGACGGGGCTT
AAGAGAGAAAGAGGATCGTC

Downstream 100 bases:

>100_bases
CCCCGGGGTTTCACAGGGTTTTTCGTTACCAAAAGAAATCCGGCTCTTGCGGTGTCATTGCCGTTGACTGGCCCCGTCGC
AACCGCTACATGTTTCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLSYGVEYTDPYAWVKTLHVIAVITWMAGLFYLPRLFVYHAMETPGSAASEKFKIMERRLLRAIMNPSMIIVLVTGLLMI
EGWLSSGWLHVKLLMVAGLITMHMFNARWRRDFEADRNTRSHVFYRYANEIPTVMMLIIIPMVILKPF

Sequences:

>Translated_148_residues
MLSYGVEYTDPYAWVKTLHVIAVITWMAGLFYLPRLFVYHAMETPGSAASEKFKIMERRLLRAIMNPSMIIVLVTGLLMI
EGWLSSGWLHVKLLMVAGLITMHMFNARWRRDFEADRNTRSHVFYRYANEIPTVMMLIIIPMVILKPF
>Mature_148_residues
MLSYGVEYTDPYAWVKTLHVIAVITWMAGLFYLPRLFVYHAMETPGSAASEKFKIMERRLLRAIMNPSMIIVLVTGLLMI
EGWLSSGWLHVKLLMVAGLITMHMFNARWRRDFEADRNTRSHVFYRYANEIPTVMMLIIIPMVILKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 17285; Mature: 17285

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYGVEYTDPYAWVKTLHVIAVITWMAGLFYLPRLFVYHAMETPGSAASEKFKIMERRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LRAIMNPSMIIVLVTGLLMIEGWLSSGWLHVKLLMVAGLITMHMFNARWRRDFEADRNTR
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SHVFYRYANEIPTVMMLIIIPMVILKPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSYGVEYTDPYAWVKTLHVIAVITWMAGLFYLPRLFVYHAMETPGSAASEKFKIMERRL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LRAIMNPSMIIVLVTGLLMIEGWLSSGWLHVKLLMVAGLITMHMFNARWRRDFEADRNTR
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SHVFYRYANEIPTVMMLIIIPMVILKPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]