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The map label for this gene is ygaU [C]

Identifier: 83594915

GI number: 83594915

Start: 4129234

End: 4130292

Strand: Reverse

Name: ygaU [C]

Synonym: Rru_A3586

Alternate gene names: 83594915

Gene position: 4130292-4129234 (Counterclockwise)

Preceding gene: 83594916

Following gene: 83594914

Centisome position: 94.89

GC content: 71.2

Gene sequence:

>1059_bases
GTGACCAACCGCATTCGTCTTGTGGCCGCCATCATCGTGGCGCTGCTGCTGGTCTCTATTGCCGTGCTGGTGATGGGCCC
GGCGCCCAACTTCTCCCCCGAAGCCCCCAAACCGAGGTCCGGCGCCCTGGCCCCGGGCCCTGGCGCCACCCCCGGCCCCG
CCCCTGGTCCCGCGTCGGGCGCCCTTCCCGCCCCGGCCCCCACCTCCCCGCAATCGGCGGCCAAGCCTTTGGCCTTCGAT
ATCTTGCGCATTGAAAAGGATGGCGCCCTGGTCGCCGCCGGCCGGGCCGAGCCCGGGGCGGCGGTGATCTTGCGCGACGA
GCGGGGAATTCTTGCCGAGGGCCGCGCCGGCGCGCGGGGCGACTGGGTGCTGACGCCCAGCCGGCCGCTGGCGGCGGGGG
ATCATCTGCTGTCGCTTGAAAGCCGTGACGCCAGCGGCCCGCCGCGTGTTCTCGATGAAAAGGTGGCGGTCAGCGTTCCC
CAGCCGGCCAGCCCGGCCCCGGTGATCGCCCTGGCCCAGCCTTCGGTCGGGCCTTCGCGCCTGCTGCAGGGGCCGCCGCC
GGTCAGCGGAGCGGCGGAGTCGACCGATCTGGTGATCGTCACCGTCGATTACGATGAAAGCGGACGATTGTCGGTGGGCG
GCACGGCGGCGCCCGGCGACAGCGTGCGCGCCTATCTTGATAACACGGCGATCGGCGAGGGCGTGGTTGGCGCCGACGGC
CGGTGGGCGGTGACCACTCCCTCGCCCCTCGCTCCGGGCCGCTATACCCTGCGCGCCGATGCGATCGGCCCCGGGGGCAA
GGTCGGCGGCCGGGTGGAAATTCCCTTCCTGCGTCCCGATGTCCTGCCCAGTCCGGGGGACGGCGGCATGATGTTCGTCG
TCCAGCCCGGTAATAATCTGTGGGCGCTCGCCCGCCGGGTCTATGGCGAGGGAACGCGCTATACCGTGATCTATGAAGCC
AATCAGGCGCAGATCCGCGATCCCGATCTGATCTATCCCGGCCAGATCTTCGCGGTTCCCGACCAACCCGGGCGCCCCCC
GGCCACCTCGTCCCCCTAA

Upstream 100 bases:

>100_bases
CGCCGGGCGCGCCGCGGGGAAAGGACGGTGGACAATCTGTTCTCGCCGCCGTCTGTTGGGGTATAGTGGACGGCCGAACC
GATCCAGCGGAGCGCCTGCC

Downstream 100 bases:

>100_bases
AGGGGCGTTTTTGCCGGACCCGGCGGGCGGGCGCAACCCGCCGTCGGCAAAGGGCGTTGAGGGGATTGGGACCCCCCCCC
GGCCTGTCCTTCCATCAGAG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTNRIRLVAAIIVALLLVSIAVLVMGPAPNFSPEAPKPRSGALAPGPGATPGPAPGPASGALPAPAPTSPQSAAKPLAFD
ILRIEKDGALVAAGRAEPGAAVILRDERGILAEGRAGARGDWVLTPSRPLAAGDHLLSLESRDASGPPRVLDEKVAVSVP
QPASPAPVIALAQPSVGPSRLLQGPPPVSGAAESTDLVIVTVDYDESGRLSVGGTAAPGDSVRAYLDNTAIGEGVVGADG
RWAVTTPSPLAPGRYTLRADAIGPGGKVGGRVEIPFLRPDVLPSPGDGGMMFVVQPGNNLWALARRVYGEGTRYTVIYEA
NQAQIRDPDLIYPGQIFAVPDQPGRPPATSSP

Sequences:

>Translated_352_residues
MTNRIRLVAAIIVALLLVSIAVLVMGPAPNFSPEAPKPRSGALAPGPGATPGPAPGPASGALPAPAPTSPQSAAKPLAFD
ILRIEKDGALVAAGRAEPGAAVILRDERGILAEGRAGARGDWVLTPSRPLAAGDHLLSLESRDASGPPRVLDEKVAVSVP
QPASPAPVIALAQPSVGPSRLLQGPPPVSGAAESTDLVIVTVDYDESGRLSVGGTAAPGDSVRAYLDNTAIGEGVVGADG
RWAVTTPSPLAPGRYTLRADAIGPGGKVGGRVEIPFLRPDVLPSPGDGGMMFVVQPGNNLWALARRVYGEGTRYTVIYEA
NQAQIRDPDLIYPGQIFAVPDQPGRPPATSSP
>Mature_351_residues
TNRIRLVAAIIVALLLVSIAVLVMGPAPNFSPEAPKPRSGALAPGPGATPGPAPGPASGALPAPAPTSPQSAAKPLAFDI
LRIEKDGALVAAGRAEPGAAVILRDERGILAEGRAGARGDWVLTPSRPLAAGDHLLSLESRDASGPPRVLDEKVAVSVPQ
PASPAPVIALAQPSVGPSRLLQGPPPVSGAAESTDLVIVTVDYDESGRLSVGGTAAPGDSVRAYLDNTAIGEGVVGADGR
WAVTTPSPLAPGRYTLRADAIGPGGKVGGRVEIPFLRPDVLPSPGDGGMMFVVQPGNNLWALARRVYGEGTRYTVIYEAN
QAQIRDPDLIYPGQIFAVPDQPGRPPATSSP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35817; Mature: 35686

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRIRLVAAIIVALLLVSIAVLVMGPAPNFSPEAPKPRSGALAPGPGATPGPAPGPASG
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ALPAPAPTSPQSAAKPLAFDILRIEKDGALVAAGRAEPGAAVILRDERGILAEGRAGARG
CCCCCCCCCCHHHCCCEEEEEEEEECCCCEEEECCCCCCCEEEEECCCCCEECCCCCCCC
DWVLTPSRPLAAGDHLLSLESRDASGPPRVLDEKVAVSVPQPASPAPVIALAQPSVGPSR
CEEECCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCEEEEECCCCCHHH
LLQGPPPVSGAAESTDLVIVTVDYDESGRLSVGGTAAPGDSVRAYLDNTAIGEGVVGADG
HCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCEEEEECCCCCCCCEECCCC
RWAVTTPSPLAPGRYTLRADAIGPGGKVGGRVEIPFLRPDVLPSPGDGGMMFVVQPGNNL
CEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECEECCCCCCCCCCCCEEEEEECCCCH
WALARRVYGEGTRYTVIYEANQAQIRDPDLIYPGQIFAVPDQPGRPPATSSP
HHHHHHHHCCCCEEEEEEECCCCCCCCCCEECCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TNRIRLVAAIIVALLLVSIAVLVMGPAPNFSPEAPKPRSGALAPGPGATPGPAPGPASG
CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ALPAPAPTSPQSAAKPLAFDILRIEKDGALVAAGRAEPGAAVILRDERGILAEGRAGARG
CCCCCCCCCCHHHCCCEEEEEEEEECCCCEEEECCCCCCCEEEEECCCCCEECCCCCCCC
DWVLTPSRPLAAGDHLLSLESRDASGPPRVLDEKVAVSVPQPASPAPVIALAQPSVGPSR
CEEECCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCEEEEECCCCCHHH
LLQGPPPVSGAAESTDLVIVTVDYDESGRLSVGGTAAPGDSVRAYLDNTAIGEGVVGADG
HCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCEEEEECCCCCCCCEECCCC
RWAVTTPSPLAPGRYTLRADAIGPGGKVGGRVEIPFLRPDVLPSPGDGGMMFVVQPGNNL
CEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECEECCCCCCCCCCCCEEEEEECCCCH
WALARRVYGEGTRYTVIYEANQAQIRDPDLIYPGQIFAVPDQPGRPPATSSP
HHHHHHHHCCCCEEEEEEECCCCCCCCCCEECCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA