| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594916
Identifier: 83594916
GI number: 83594916
Start: 4130407
End: 4131249
Strand: Reverse
Name: 83594916
Synonym: Rru_A3587
Alternate gene names: NA
Gene position: 4131249-4130407 (Counterclockwise)
Preceding gene: 83594920
Following gene: 83594915
Centisome position: 94.91
GC content: 75.56
Gene sequence:
>843_bases ATGAGTGTTTCCCTTCTTCCTTCGCTTCTGCCCTTCGCCCTGGCGGTGGCCGGCGCCGGCCTTGCCGGGTTGGTCGGCCG GCTGCTTGGCCGAGCCGAGCTTGGCGACCGCCTGGCCGGCCTGGGCATCGTTCTGGGGCTGGGGGCGGGCTGGCTGTGGT TGGGCGGGCCGGCGGTGCCGACCATCGCCGCCGATTGGGCGATCGCCGCCGGGGCGCTGGCGACGGCGGGGGGCGTGGTC GCCGATGCCTTGCGGCTTGGCCGGGGGCCGCGTTTGCTGGCCTTGGGCCTGGGGGCGGTGGCCGGCGGCTGGGTGATGGC GGTGGCCGGCGGCGTGGCCGCCGGGCTGTCGGCGCCCACGGCGCTGCTCGCCTGGGGCCTGACGGCGGCGGCGTGGATCG GCGTCCTTCTGCGCCTTGAAGGGCGTGGCGCCTCGGCCCCGGTGGCGGTGCTGGCCGCGGCGCTCGGTCTGGGCGGAGTC GCCTGGGCCCTGGATAACGCCCCGGTGATGGGGTTGGCGCCGGTGTTGATCTGCGCCCTGCTTGGATGGGTCTTGTGGTC GGGCCTGCGCCGTCTGGCGTTCTCGGCCACCGCCTGCGCCGCTTCGGCCGGTTTCACCGTCGCCTTGGCCACTGCCATGG CCTTGGATATGCCCGGCGCCCTGCCCGCCCTGGCGGTCGGCGGCCTGTGCCTGTTCGCCGATGGCACGGCGGCCCGCCTT GTGCCGCCAAGGCGGCGTAAGGTGCCGCGCCATCGTCTGCTGGTCCATGCCGGCCTGTCCCTGGCGCCGCTGCCCATCGC CCTGGCCCTGGCCCTGATCGCCGCCGGCATGCCGGCCCACTAG
Upstream 100 bases:
>100_bases CGAACCGCGTTGAAGGATCTTGCTTTAACGCGATGTGATCGAGGATGGCCGCCGGTTTTTTACGTATCAGGCTTGCAAGG AGCGTCCCGTCGTCCCGCCC
Downstream 100 bases:
>100_bases GCGGTTCGCCGATCCGCCGGGCGCGCCGCGGGGAAAGGACGGTGGACAATCTGTTCTCGCCGCCGTCTGTTGGGGTATAG TGGACGGCCGAACCGATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSVSLLPSLLPFALAVAGAGLAGLVGRLLGRAELGDRLAGLGIVLGLGAGWLWLGGPAVPTIAADWAIAAGALATAGGVV ADALRLGRGPRLLALGLGAVAGGWVMAVAGGVAAGLSAPTALLAWGLTAAAWIGVLLRLEGRGASAPVAVLAAALGLGGV AWALDNAPVMGLAPVLICALLGWVLWSGLRRLAFSATACAASAGFTVALATAMALDMPGALPALAVGGLCLFADGTAARL VPPRRRKVPRHRLLVHAGLSLAPLPIALALALIAAGMPAH
Sequences:
>Translated_280_residues MSVSLLPSLLPFALAVAGAGLAGLVGRLLGRAELGDRLAGLGIVLGLGAGWLWLGGPAVPTIAADWAIAAGALATAGGVV ADALRLGRGPRLLALGLGAVAGGWVMAVAGGVAAGLSAPTALLAWGLTAAAWIGVLLRLEGRGASAPVAVLAAALGLGGV AWALDNAPVMGLAPVLICALLGWVLWSGLRRLAFSATACAASAGFTVALATAMALDMPGALPALAVGGLCLFADGTAARL VPPRRRKVPRHRLLVHAGLSLAPLPIALALALIAAGMPAH >Mature_279_residues SVSLLPSLLPFALAVAGAGLAGLVGRLLGRAELGDRLAGLGIVLGLGAGWLWLGGPAVPTIAADWAIAAGALATAGGVVA DALRLGRGPRLLALGLGAVAGGWVMAVAGGVAAGLSAPTALLAWGLTAAAWIGVLLRLEGRGASAPVAVLAAALGLGGVA WALDNAPVMGLAPVLICALLGWVLWSGLRRLAFSATACAASAGFTVALATAMALDMPGALPALAVGGLCLFADGTAARLV PPRRRKVPRHRLLVHAGLSLAPLPIALALALIAAGMPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27292; Mature: 27161
Theoretical pI: Translated: 12.03; Mature: 12.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSLLPSLLPFALAVAGAGLAGLVGRLLGRAELGDRLAGLGIVLGLGAGWLWLGGPAVP CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC TIAADWAIAAGALATAGGVVADALRLGRGPRLLALGLGAVAGGWVMAVAGGVAAGLSAPT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHH ALLAWGLTAAAWIGVLLRLEGRGASAPVAVLAAALGLGGVAWALDNAPVMGLAPVLICAL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH LGWVLWSGLRRLAFSATACAASAGFTVALATAMALDMPGALPALAVGGLCLFADGTAARL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCC VPPRRRKVPRHRLLVHAGLSLAPLPIALALALIAAGMPAH CCCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVSLLPSLLPFALAVAGAGLAGLVGRLLGRAELGDRLAGLGIVLGLGAGWLWLGGPAVP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC TIAADWAIAAGALATAGGVVADALRLGRGPRLLALGLGAVAGGWVMAVAGGVAAGLSAPT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHH ALLAWGLTAAAWIGVLLRLEGRGASAPVAVLAAALGLGGVAWALDNAPVMGLAPVLICAL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH LGWVLWSGLRRLAFSATACAASAGFTVALATAMALDMPGALPALAVGGLCLFADGTAARL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCC VPPRRRKVPRHRLLVHAGLSLAPLPIALALALIAAGMPAH CCCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA