| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594876
Identifier: 83594876
GI number: 83594876
Start: 4085730
End: 4086077
Strand: Direct
Name: 83594876
Synonym: Rru_A3547
Alternate gene names: NA
Gene position: 4085730-4086077 (Clockwise)
Preceding gene: 83594875
Following gene: 83594877
Centisome position: 93.86
GC content: 60.92
Gene sequence:
>348_bases ATGGAACCCAAAGACACCACGACCAACGACGCGTTCAAGGGATTTACCAATACCGCCTGTCCCTTCCTGCCCTGTCACAA GGGGGTGAAGCGCGAGTTCAACTGCCTGTTTTGCTACTGTCCGCTGATCGCCTATGAATGCCCGGGACCCTATCAGGTCT ATACGGACAAGAACGGCCTGACCCGCAAGGACTGTACAAACTGCACCCTGCCCCATGACGGCTATCTAGCCTCGTGGAAC TTCATCCAGAAATGGCTGGAGCGTCCGGTGATCTGGTCGGGCGCGGCGCAAACCACCCCGCCAACCCGCCGGCCGGGCCG CGCGCCGGGCGATGGGGACGAGGAGTAA
Upstream 100 bases:
>100_bases CCACGCCGCCTAAGAGTGTTTGCCCGGACGCTTGTGCACCCTTACATGGAGGAGGGGGCGGGGGGTACAACGGGCCCGCC CCGCCCGTCCTGGAGACGTC
Downstream 100 bases:
>100_bases ACGCCAGAGAGGTGCCTCGCGGGGCGGGATATCAACCGGTGGTTTCTTAGCCCCGAAGGCCTCTGTCACGAAATGTTGAC AGTTGAGTCTCTTGCAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MEPKDTTTNDAFKGFTNTACPFLPCHKGVKREFNCLFCYCPLIAYECPGPYQVYTDKNGLTRKDCTNCTLPHDGYLASWN FIQKWLERPVIWSGAAQTTPPTRRPGRAPGDGDEE
Sequences:
>Translated_115_residues MEPKDTTTNDAFKGFTNTACPFLPCHKGVKREFNCLFCYCPLIAYECPGPYQVYTDKNGLTRKDCTNCTLPHDGYLASWN FIQKWLERPVIWSGAAQTTPPTRRPGRAPGDGDEE >Mature_115_residues MEPKDTTTNDAFKGFTNTACPFLPCHKGVKREFNCLFCYCPLIAYECPGPYQVYTDKNGLTRKDCTNCTLPHDGYLASWN FIQKWLERPVIWSGAAQTTPPTRRPGRAPGDGDEE
Specific function: Unknown
COG id: COG2158
COG function: function code R; Uncharacterized protein containing a Zn-finger-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12983; Mature: 12983
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPKDTTTNDAFKGFTNTACPFLPCHKGVKREFNCLFCYCPLIAYECPGPYQVYTDKNGL CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEEECCCCC TRKDCTNCTLPHDGYLASWNFIQKWLERPVIWSGAAQTTPPTRRPGRAPGDGDEE CCCCCCCCCCCCCCEEECCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEPKDTTTNDAFKGFTNTACPFLPCHKGVKREFNCLFCYCPLIAYECPGPYQVYTDKNGL CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEEECCCCC TRKDCTNCTLPHDGYLASWNFIQKWLERPVIWSGAAQTTPPTRRPGRAPGDGDEE CCCCCCCCCCCCCCEEECCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA