Click here to switch to the map view.

The map label for this gene is bchE [H]

Identifier: 83594877

GI number: 83594877

Start: 4086296

End: 4087903

Strand: Direct

Name: bchE [H]

Synonym: Rru_A3548

Alternate gene names: 83594877

Gene position: 4086296-4087903 (Clockwise)

Preceding gene: 83594876

Following gene: 83594878

Centisome position: 93.88

GC content: 62.25

Gene sequence:

>1608_bases
ATGCGTATTCTCTTCGTCCATCCCAACTATCATTCCGGCGGCGCCGAAGTCGCGGGCAAGTGGTCCCCGGCATGGGTCGC
CTATCTGGCCGGTTACCTGAAGGCCGGCGGCTATTCCGACATCCGCTTCGTCGACGCCATGACCGACGATATGACGGAAG
AAGAGCTGCGCGCCATCTTCGCCGCCGAACAGCCCGATGTCATCGGCACCACGGCGGTCACCCCGGCGATCTACAAGGCC
GAGCGGGTGCTGGAAATCGCCCGCGAGGAATGCCCCAACGCCGTCACCATCCTAGGCGGCATCCACGCCACCTTCATGTT
CCAGCAGGTTCTGGTCGAAGCGCCGTGGATCGACACCGTGGTTCGCGGCGAGGGCGAGGCGGTGACGCTCAACCTGATCC
GCGCCATCGACGAGGGCCGCTGGCCCGCCGATCGCGCCTCGATCAAGGGCATCGCCTATCTGGAAGACACCAAGGTCGTC
GCCACCCCGGCCGAGCCGCCGATCCGCGACGTCGATTCCATCATTCCCGATTGGGGCGTGCTGGAATGGAAGAAGTACAT
CTACATTCCGCTCGGCGTGCCCGTCGCCACCCCCAATATGGCGCGCGGCTGTCCCTTCACCTGCAGCTTCTGTTCGCAAT
GGAAGTTCTGGCGCGATTACCGGGTGCGCGACCCCAAGAAGGTGGTCGACGAGATCGAGATCCTGGTGCGTCAGCACGGA
GTCGGCTTCTTCATCCTCGCCGACGAGGAACCGACGATCAACCGCAACAAGTTCGTCGAGTTCTGCGAGGAGCTGATCCG
CCGCGATCTGGGCGTGATGTGGGGCATCAACACCCGCGTCACCGACATCATGCGCGACGAGGATCTGCTGCCGCTCTACC
GCAAGGCCGGCCTGATCCATATCTCGCTCGGCACCGAGGCCGCGGCCCAGCTCAACCTCGACATCTTCCACAAGGAAACC
ACGGTCGCCCAGAACAAGAGGGCGATCGAGCTGTTGCGCAAGCACGGCATCGTCACCGAGGCGCAGTTCATCGTCGGTCT
GGAAAACGAGACCGCCGAGACCCTCGAAGAAACCTACAAGATGTGCATGGACTGGAACCCGGACATGGCCAACTGGTCCA
TGTTCACGCCCTGGCCCTTCTCCGATCTGTTCCATGAACTGGGCGACAAGGTCGAGATTTTCGACTTTGAGAAGTACAAC
TTCGTCACCCCGATCATGAAGCCCAACGCGATGGATCGCGCCGAGCTGCTTGACCGGGTGATGCACAACTATCGCCGCTT
CTATATGCGCAAGTCGTTCCTGGGCTATCCCTGGGTGCTCAACCGGGTGCGCCGGCGCTATCTGCTGGGCTGCCTGAAGG
CGTTCTTGCTCAGCGCCTTCCAGCGCAAATTCTATGACCTGGGCCGGGCCGGCTATTGGGGTCCGCAGTCCAAGAAGAAG
GTCGATTTCCACTTCGACCACTCGCGCACCCTGGTCAAACCCCAGGAAGACAACTGGAAGAACGCGCCCAAGCACAAGCG
TCCGGCCGCGGCGATGAAGGCCTGTGGTGGCGGCGACGAGCAGCTTGCCGAAAGCCTGACCCCGCCGCCGGTCAAGGTGA
AGATCTAA

Upstream 100 bases:

>100_bases
CCGCGCAAAATCGCCCGACCGTGGAGACACGAAAAACGCTTGCCCCGCCCCCTTTCCTCGCCGGGAACGCGGCGGGAGAT
CCGTTGCGCGGGAGCCCTCT

Downstream 100 bases:

>100_bases
GGACGGTCCCCGCCCCCCCGGCCTCGCCAAAAAAGCGGGCCGGGGGGGCGGGAATTTGCATGATCGCTTTTTCCGGGGCG
GGCGGACCGCCTTGACGGGC

Product: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase

Products: NA

Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MRILFVHPNYHSGGAEVAGKWSPAWVAYLAGYLKAGGYSDIRFVDAMTDDMTEEELRAIFAAEQPDVIGTTAVTPAIYKA
ERVLEIAREECPNAVTILGGIHATFMFQQVLVEAPWIDTVVRGEGEAVTLNLIRAIDEGRWPADRASIKGIAYLEDTKVV
ATPAEPPIRDVDSIIPDWGVLEWKKYIYIPLGVPVATPNMARGCPFTCSFCSQWKFWRDYRVRDPKKVVDEIEILVRQHG
VGFFILADEEPTINRNKFVEFCEELIRRDLGVMWGINTRVTDIMRDEDLLPLYRKAGLIHISLGTEAAAQLNLDIFHKET
TVAQNKRAIELLRKHGIVTEAQFIVGLENETAETLEETYKMCMDWNPDMANWSMFTPWPFSDLFHELGDKVEIFDFEKYN
FVTPIMKPNAMDRAELLDRVMHNYRRFYMRKSFLGYPWVLNRVRRRYLLGCLKAFLLSAFQRKFYDLGRAGYWGPQSKKK
VDFHFDHSRTLVKPQEDNWKNAPKHKRPAAAMKACGGGDEQLAESLTPPPVKVKI

Sequences:

>Translated_535_residues
MRILFVHPNYHSGGAEVAGKWSPAWVAYLAGYLKAGGYSDIRFVDAMTDDMTEEELRAIFAAEQPDVIGTTAVTPAIYKA
ERVLEIAREECPNAVTILGGIHATFMFQQVLVEAPWIDTVVRGEGEAVTLNLIRAIDEGRWPADRASIKGIAYLEDTKVV
ATPAEPPIRDVDSIIPDWGVLEWKKYIYIPLGVPVATPNMARGCPFTCSFCSQWKFWRDYRVRDPKKVVDEIEILVRQHG
VGFFILADEEPTINRNKFVEFCEELIRRDLGVMWGINTRVTDIMRDEDLLPLYRKAGLIHISLGTEAAAQLNLDIFHKET
TVAQNKRAIELLRKHGIVTEAQFIVGLENETAETLEETYKMCMDWNPDMANWSMFTPWPFSDLFHELGDKVEIFDFEKYN
FVTPIMKPNAMDRAELLDRVMHNYRRFYMRKSFLGYPWVLNRVRRRYLLGCLKAFLLSAFQRKFYDLGRAGYWGPQSKKK
VDFHFDHSRTLVKPQEDNWKNAPKHKRPAAAMKACGGGDEQLAESLTPPPVKVKI
>Mature_535_residues
MRILFVHPNYHSGGAEVAGKWSPAWVAYLAGYLKAGGYSDIRFVDAMTDDMTEEELRAIFAAEQPDVIGTTAVTPAIYKA
ERVLEIAREECPNAVTILGGIHATFMFQQVLVEAPWIDTVVRGEGEAVTLNLIRAIDEGRWPADRASIKGIAYLEDTKVV
ATPAEPPIRDVDSIIPDWGVLEWKKYIYIPLGVPVATPNMARGCPFTCSFCSQWKFWRDYRVRDPKKVVDEIEILVRQHG
VGFFILADEEPTINRNKFVEFCEELIRRDLGVMWGINTRVTDIMRDEDLLPLYRKAGLIHISLGTEAAAQLNLDIFHKET
TVAQNKRAIELLRKHGIVTEAQFIVGLENETAETLEETYKMCMDWNPDMANWSMFTPWPFSDLFHELGDKVEIFDFEKYN
FVTPIMKPNAMDRAELLDRVMHNYRRFYMRKSFLGYPWVLNRVRRRYLLGCLKAFLLSAFQRKFYDLGRAGYWGPQSKKK
VDFHFDHSRTLVKPQEDNWKNAPKHKRPAAAMKACGGGDEQLAESLTPPPVKVKI

Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011772
- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61307; Mature: 61307

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFVHPNYHSGGAEVAGKWSPAWVAYLAGYLKAGGYSDIRFVDAMTDDMTEEELRAIF
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHH
AAEQPDVIGTTAVTPAIYKAERVLEIAREECPNAVTILGGIHATFMFQQVLVEAPWIDTV
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCHHHH
VRGEGEAVTLNLIRAIDEGRWPADRASIKGIAYLEDTKVVATPAEPPIRDVDSIIPDWGV
CCCCCCEEEHHHHHHHHCCCCCCCHHCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCC
LEWKKYIYIPLGVPVATPNMARGCPFTCSFCSQWKFWRDYRVRDPKKVVDEIEILVRQHG
EEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCC
VGFFILADEEPTINRNKFVEFCEELIRRDLGVMWGINTRVTDIMRDEDLLPLYRKAGLIH
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCCCHHHHHHCCEEE
ISLGTEAAAQLNLDIFHKETTVAQNKRAIELLRKHGIVTEAQFIVGLENETAETLEETYK
EEECCCCHHEECEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHH
MCMDWNPDMANWSMFTPWPFSDLFHELGDKVEIFDFEKYNFVTPIMKPNAMDRAELLDRV
HHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
MHNYRRFYMRKSFLGYPWVLNRVRRRYLLGCLKAFLLSAFQRKFYDLGRAGYWGPQSKKK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
VDFHFDHSRTLVKPQEDNWKNAPKHKRPAAAMKACGGGDEQLAESLTPPPVKVKI
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MRILFVHPNYHSGGAEVAGKWSPAWVAYLAGYLKAGGYSDIRFVDAMTDDMTEEELRAIF
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHH
AAEQPDVIGTTAVTPAIYKAERVLEIAREECPNAVTILGGIHATFMFQQVLVEAPWIDTV
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCHHHH
VRGEGEAVTLNLIRAIDEGRWPADRASIKGIAYLEDTKVVATPAEPPIRDVDSIIPDWGV
CCCCCCEEEHHHHHHHHCCCCCCCHHCCCEEEEEECCEEEECCCCCCHHHHHHHCCCCCC
LEWKKYIYIPLGVPVATPNMARGCPFTCSFCSQWKFWRDYRVRDPKKVVDEIEILVRQHG
EEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCC
VGFFILADEEPTINRNKFVEFCEELIRRDLGVMWGINTRVTDIMRDEDLLPLYRKAGLIH
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCCCHHHHHHCCEEE
ISLGTEAAAQLNLDIFHKETTVAQNKRAIELLRKHGIVTEAQFIVGLENETAETLEETYK
EEECCCCHHEECEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHH
MCMDWNPDMANWSMFTPWPFSDLFHELGDKVEIFDFEKYNFVTPIMKPNAMDRAELLDRV
HHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
MHNYRRFYMRKSFLGYPWVLNRVRRRYLLGCLKAFLLSAFQRKFYDLGRAGYWGPQSKKK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
VDFHFDHSRTLVKPQEDNWKNAPKHKRPAAAMKACGGGDEQLAESLTPPPVKVKI
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA